Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC020916.2-201ENST00000591242 360 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AC006272.2-201ENST00000594725 163 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AL390877.1-201ENST00000605704 214 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 TUSC7.1-201ENST00000610969 165 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 AL121890.3-201ENST00000618494 516 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 OR8A1-204ENST00000642111 1145 ntBASIC6.52□□□□□ -1.37
CCDC66A2RUB6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC66A2RUB6 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 MTCO1P18-201ENST00000455518 1419 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 SNORA43.1-201ENST00000364863 140 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AL356131.1-201ENST00000405826 414 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 RPS7P9-201ENST00000414704 586 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AL008987.1-201ENST00000415528 237 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 RPL21P50-201ENST00000417698 477 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 Z82198.3-201ENST00000421145 199 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 HSPE1P16-201ENST00000426640 348 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 OR6R1P-201ENST00000431838 940 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC096632.2-201ENST00000438139 1239 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 EMC3-AS1-205ENST00000438698 534 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 DNAJA1P5-201ENST00000440278 943 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 PTENP1-201ENST00000447117 1215 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 OR51B8P-201ENST00000449892 769 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 KF459542.1-201ENST00000450908 553 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC244505.3-201ENST00000454598 187 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 TPTE2P5-203ENST00000458118 728 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC073594.1-201ENST00000462065 364 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC005165.2-201ENST00000466070 380 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 RPS7P11-201ENST00000484240 586 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC091951.3-201ENST00000504093 246 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC092349.1-201ENST00000504903 310 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 RNA5SP418-201ENST00000515951 117 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 OR5AM1P-201ENST00000532136 1032 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 OR9G2P-201ENST00000533326 880 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC023813.2-201ENST00000564321 469 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AL133507.1-201ENST00000605269 557 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AL158042.1-201ENST00000605338 460 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 MIR6885-201ENST00000612241 66 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 AC017007.4-201ENST00000503353 1352 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 SPATA2P1-201ENST00000431223 2055 ntBASIC6.51□□□□□ -1.37
CCDC66A2RUB6 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
CCDC66A2RUB6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 AL034546.1-201ENST00000623740 3693 ntBASIC6.5□□□□□ -1.37
CCDC66A2RUB6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 Y_RNA.318-201ENST00000365131 97 ntBASIC6.5□□□□□ -1.37
CCDC66A2RUB6 MTCO1P56-201ENST00000401674 224 ntBASIC6.5□□□□□ -1.37
CCDC66A2RUB6 MIR1302-8-201ENST00000408342 128 ntBASIC6.5□□□□□ -1.37
CCDC66A2RUB6 AL356320.2-201ENST00000417263 507 ntBASIC6.5□□□□□ -1.37
CCDC66A2RUB6 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 NANOGP2-201ENST00000435391 727 ntBASIC6.5□□□□□ -1.37
CCDC66A2RUB6 Z84478.1-201ENST00000438230 1219 ntBASIC6.5□□□□□ -1.37
CCDC66A2RUB6 AL008629.1-201ENST00000438615 184 ntBASIC6.5□□□□□ -1.37
CCDC66A2RUB6 GTF2IP14-201ENST00000441415 586 ntBASIC6.5□□□□□ -1.37
CCDC66A2RUB6 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC66A2RUB6 EXTL2P1-201ENST00000446218 416 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms