Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 MTND4LP13-201ENST00000425022 298 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 NAP1L4P2-201ENST00000425958 899 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 HMGB1P32-201ENST00000425971 565 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 NANOGP4-201ENST00000427230 913 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 PPIAP27-201ENST00000453800 265 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 RPL7P41-201ENST00000485823 957 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC112484.3-201ENST00000505910 329 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC117525.1-201ENST00000515228 503 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 RN7SKP46-201ENST00000515942 234 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 RN7SKP35-201ENST00000517210 151 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC105031.1-201ENST00000518550 476 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 IGHVIII-11-1-201ENST00000522733 267 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 EIF4A2P5-201ENST00000529914 499 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 HMGB1P42-201ENST00000532126 553 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 DYNLL1P4-201ENST00000549314 266 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 CD24P2-201ENST00000565486 219 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC015871.5-202ENST00000623252 701 ntBASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.42□□□□□ -1.7
KCNIP3Q9Y2W7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 VPS35P1-201ENST00000563400 1518 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 LINC01109-201ENST00000603837 3081 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 VN2R3P-201ENST00000422626 1412 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 LINC01963-201ENST00000562038 3148 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 SNORA64.1-201ENST00000362600 132 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 RNU6-670P-201ENST00000364312 104 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 RNU6-891P-201ENST00000384280 111 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 CXADRP1-201ENST00000398098 1095 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 DBIP1-201ENST00000401435 260 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 HSPA8P15-201ENST00000401676 786 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 CYCSP10-201ENST00000417973 294 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AC013470.3-201ENST00000420252 1194 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 KCTD9P1-201ENST00000430462 1167 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 RPSAP32-201ENST00000432681 526 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 TPTE2P1-204ENST00000435256 593 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 GAPDHP59-201ENST00000435908 267 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 MTND6P18-201ENST00000439477 513 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AC138938.1-201ENST00000515431 782 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 SCARNA16.4-201ENST00000516956 187 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AP000648.1-201ENST00000529682 397 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 IGBP1P1-201ENST00000554337 1009 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 HMGN1P26-201ENST00000558737 303 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AP000769.2-201ENST00000602344 396 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AL137072.1-201ENST00000603444 466 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AC009597.2-201ENST00000604659 592 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AL031601.1-201ENST00000605702 394 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AC018695.5-201ENST00000605872 315 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AC007620.3-201ENST00000608131 497 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AC037198.3-201ENST00000616754 526 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 AC131238.1-201ENST00000617135 328 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 MIR6721-201ENST00000617181 87 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 CXADRP3-202ENST00000617265 1100 ntBASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
KCNIP3Q9Y2W7 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms