Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 SNORA11C-201ENST00000408532 129 ntBASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 CYCSP11-201ENST00000436426 315 ntBASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 MORF4L1P3-201ENST00000525966 950 ntBASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 AC092653.1-201ENST00000608509 531 ntBASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 AC108359.1-201ENST00000616451 1211 ntBASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.52□□□□□ -1.21
SHANK2Q9UPX8 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 U3.30-201ENST00000391308 210 ntBASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 U3.32-201ENST00000408116 212 ntBASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 RPL21P129-201ENST00000491732 478 ntBASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 AC111000.3-201ENST00000508057 576 ntBASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 AC027369.5-201ENST00000533838 755 ntBASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 ARL1-211ENST00000551828 776 ntTSL 5 BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 AL139041.1-201ENST00000605480 610 ntBASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 DLEU1_1.1-201ENST00000618107 190 ntBASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 ZNF652P1-201ENST00000442420 1309 ntBASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SHANK2Q9UPX8 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 MIR23B-201ENST00000384832 97 ntBASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 SNORA57.1-201ENST00000391227 145 ntBASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 RNU6ATAC34P-201ENST00000408879 121 ntBASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 SUMO2P19-201ENST00000518920 295 ntBASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 AC098935.2-201ENST00000604222 466 ntBASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 AC021422.1-201ENST00000621212 473 ntBASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 SAMMSON-226ENST00000642089 1582 ntBASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SHANK2Q9UPX8 RNA5SP191-201ENST00000362585 102 ntBASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 RNA5-8SP7-201ENST00000363443 155 ntBASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 RNA5SP241-201ENST00000391326 114 ntBASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 RSU1P3-201ENST00000412878 835 ntBASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 SSR3-206ENST00000476217 807 ntTSL 3 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 AC021483.2-201ENST00000567415 758 ntBASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SHANK2Q9UPX8 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms