Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC096656.1-201ENST00000623826 1364 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC011504.1-201ENST00000623331 4103 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 MRE11P1-201ENST00000464884 2127 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 AC092692.1-201ENST00000623625 2595 ntBASIC5.53□□□□□ -1.52
LRFN1Q9P244 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LRFN1Q9P244 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC027088.4-201ENST00000611559 1947 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 RARSP1-201ENST00000542842 1418 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 TMSB4XP4-201ENST00000323496 618 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 MIR323A-201ENST00000362199 86 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AL096800.1-201ENST00000405326 893 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 PCBP2P1-201ENST00000437262 977 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC092170.1-201ENST00000440211 356 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC068135.1-201ENST00000446164 246 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 TRY2P-201ENST00000448860 689 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 NPM1P19-201ENST00000450070 712 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 GEMIN2P1-201ENST00000454246 752 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 AOX3P-204ENST00000491025 2107 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 UBE2V1P12-201ENST00000503954 474 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC147055.3-201ENST00000510547 851 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 RN7SKP67-201ENST00000515905 235 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 PCNAP4-201ENST00000532690 730 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 ZNF322P1-201ENST00000568013 1209 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 MIR4443-201ENST00000585052 53 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 MIR6768-201ENST00000610734 72 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 AL021918.2-201ENST00000613415 194 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AL590396.4-201ENST00000636779 956 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC027228.2-201ENST00000567141 2154 ntBASIC5.52□□□□□ -1.53
LRFN1Q9P244 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LRFN1Q9P244 AC006042.3-201ENST00000454684 1469 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.51□□□□□ -1.53
LRFN1Q9P244 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 SNORD8-201ENST00000363915 110 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 AC087752.1-201ENST00000391360 558 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRFN1Q9P244 MTCO2P8-201ENST00000412213 658 ntBASIC5.51□□□□□ -1.53
LRFN1Q9P244 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms