Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL20A1Q9P218 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL20A1Q9P218 AC005294.1-201ENST00000355509 281 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 RNU1-19P-201ENST00000363306 165 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 U3.10-201ENST00000364459 214 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 MIR223-201ENST00000385204 110 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 NPM1P37-201ENST00000403105 874 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 METTL15P3-201ENST00000415522 1221 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 RPL23AP18-201ENST00000416139 468 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 AC108075.1-201ENST00000424692 529 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 AC011242.1-201ENST00000433596 1158 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 RNFT1P2-201ENST00000443064 757 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 RPL7P39-201ENST00000481157 744 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 RPL32P9-201ENST00000487963 407 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 RN7SL808P-201ENST00000496066 299 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 AC121161.1-201ENST00000510606 652 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 MTND6P2-201ENST00000512226 524 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 AC127381.1-201ENST00000555979 939 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 YWHAZP1-201ENST00000556286 722 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 AC044860.2-201ENST00000561005 179 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 H3F3BP2-201ENST00000583907 357 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 AC034236.3-201ENST00000605999 461 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 AC067838.1-201ENST00000606064 577 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 AC004808.1-201ENST00000627671 721 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL20A1Q9P218 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 AC007382.1-201ENST00000624376 2618 ntBASIC6.21□□□□□ -1.42
COL20A1Q9P218 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL20A1Q9P218 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL20A1Q9P218 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL20A1Q9P218 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL20A1Q9P218 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL20A1Q9P218 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL20A1Q9P218 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 AL158827.1-201ENST00000416300 391 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 AC005033.1-201ENST00000428904 813 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL20A1Q9P218 H3F3BP1-201ENST00000440551 403 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 RPS23P9-201ENST00000448848 438 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 SYT14P1-201ENST00000481459 721 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 AC108729.1-201ENST00000487812 947 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 RN7SL447P-201ENST00000494711 245 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL20A1Q9P218 AC110760.3-202ENST00000515177 371 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL20A1Q9P218 AC008126.1-201ENST00000549019 480 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 AC004825.1-201ENST00000555068 586 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 AC023158.1-201ENST00000561632 1025 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL20A1Q9P218 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 AF230666.2-201ENST00000602328 725 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 AC096947.1-201ENST00000603233 470 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 AC079880.2-201ENST00000603790 1213 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 AP002505.2-201ENST00000623585 696 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 AC099654.9-201ENST00000637055 678 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 SAMMSON-227ENST00000642114 1199 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 KYNUP3-201ENST00000574386 1341 ntBASIC6.2□□□□□ -1.42
COL20A1Q9P218 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.2□□□□□ -1.42
COL20A1Q9P218 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL20A1Q9P218 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.19□□□□□ -1.42
COL20A1Q9P218 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL20A1Q9P218 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.19□□□□□ -1.42
COL20A1Q9P218 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL20A1Q9P218 AL158152.1-201ENST00000602652 1435 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL20A1Q9P218 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.19□□□□□ -1.42
COL20A1Q9P218 AC011493.1-201ENST00000596753 1632 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 U8.4-201ENST00000363626 134 ntBASIC6.19□□□□□ -1.42
COL20A1Q9P218 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.19□□□□□ -1.42
COL20A1Q9P218 SNORA70.9-201ENST00000384370 135 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms