Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AC093909.5-201ENST00000621839 1799 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VAPAQ9P0L0 AL731566.1-201ENST00000620490 1937 ntBASIC4.82□□□□□ -1.64
VAPAQ9P0L0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 Z95331.1-201ENST00000623075 23112 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AC235565.1-201ENST00000456962 1325 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 OR56A4-201ENST00000330728 1209 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 RNU6-233P-201ENST00000410845 141 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 SETP10-201ENST00000424368 814 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 GAPDHP34-201ENST00000432112 823 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 HMGN1P36-201ENST00000446623 298 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AC093166.2-201ENST00000455969 1017 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AL133445.1-201ENST00000467051 452 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AC027308.1-201ENST00000517993 110 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AC005868.1-201ENST00000536421 331 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AC126177.5-201ENST00000549599 178 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 SUGT1P3-202ENST00000604259 383 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 RPSAP73-201ENST00000614820 330 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AC135068.12-201ENST00000637370 931 ntBASIC4.81□□□□□ -1.64
VAPAQ9P0L0 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
VAPAQ9P0L0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 NEAT1-202ENST00000501122 22743 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 MIR1182-201ENST00000408363 97 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 RNU2-18P-201ENST00000411224 162 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 OR13Z1P-201ENST00000416141 834 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 AL133325.1-201ENST00000421090 382 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 RPL34P6-201ENST00000432390 345 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 CYCSP6-201ENST00000434498 302 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 CYCSP12-201ENST00000437729 300 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 AP000281.1-201ENST00000444036 316 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 AC004980.3-201ENST00000447046 365 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 RPS26P41-201ENST00000450370 284 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 ENPP7P9-201ENST00000514456 627 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 RNA5SP440-201ENST00000612665 119 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 RN7SL787P-201ENST00000613000 284 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 AC015871.5-202ENST00000623252 701 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 MTCO1P15-201ENST00000529569 1526 ntBASIC4.8□□□□□ -1.64
VAPAQ9P0L0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
VAPAQ9P0L0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms