Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 TRGV7-201ENST00000427089 353 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 COX6CP13-201ENST00000428703 226 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 FAM96AP1-201ENST00000430879 482 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 GAPDHP34-201ENST00000432112 823 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 CYCSP12-201ENST00000437729 300 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 RPS26P41-201ENST00000450370 284 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 RPL7P45-201ENST00000455851 743 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AC135999.1-201ENST00000478962 479 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 CCNHP1-201ENST00000513311 678 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AC005868.1-201ENST00000536421 331 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AC126177.5-201ENST00000549599 178 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AC104695.2-201ENST00000605056 775 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AL603750.1-201ENST00000624216 1717 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 STX3-208ENST00000641815 3236 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 RN7SKP286-201ENST00000410894 299 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 SDHDP6-201ENST00000414693 480 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 BX323845.1-201ENST00000432417 179 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 RPL7P6-201ENST00000480903 738 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC015864.1-201ENST00000496512 544 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 RNA5SP303-201ENST00000516192 130 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 RNU6-943P-201ENST00000516960 98 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 FTH1P11-201ENST00000517577 551 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 HNRNPRP2-201ENST00000528421 743 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 BNIP3P1-201ENST00000547295 580 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 NDUFB4P11-201ENST00000560510 395 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 RNA5SP440-201ENST00000612665 119 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC005840.5-201ENST00000619166 599 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC243960.7-201ENST00000623532 707 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AL691477.1-201ENST00000624398 162 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC135068.12-201ENST00000637370 931 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 AC074101.1-201ENST00000637861 241 ntBASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.27□□□□□ -1.73
HDHD3Q9BSH5 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDHD3Q9BSH5 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.26□□□□□ -1.73
HDHD3Q9BSH5 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDHD3Q9BSH5 AC020633.1-201ENST00000468439 2247 ntBASIC4.26□□□□□ -1.73
HDHD3Q9BSH5 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HDHD3Q9BSH5 MRRFP1-201ENST00000435941 1675 ntBASIC4.26□□□□□ -1.73
HDHD3Q9BSH5 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.26□□□□□ -1.73
HDHD3Q9BSH5 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms