Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNU1-149P-201ENST00000390870 161 ntBASIC4.91□□□□□ -1.62
COL21A1Q96P44 RPL10P10-201ENST00000403509 664 ntBASIC4.91□□□□□ -1.62
COL21A1Q96P44 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 AL606490.1-201ENST00000452266 765 ntBASIC4.91□□□□□ -1.62
COL21A1Q96P44 AC011225.1-201ENST00000457751 369 ntBASIC4.91□□□□□ -1.62
COL21A1Q96P44 AC079168.1-201ENST00000458741 345 ntBASIC4.91□□□□□ -1.62
COL21A1Q96P44 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 RPL10P14-201ENST00000565265 298 ntBASIC4.91□□□□□ -1.62
COL21A1Q96P44 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 AP005262.1-201ENST00000582646 997 ntBASIC4.91□□□□□ -1.62
COL21A1Q96P44 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 IMMP1LP3-201ENST00000604197 224 ntBASIC4.91□□□□□ -1.62
COL21A1Q96P44 AC109309.2-201ENST00000612597 332 ntBASIC4.91□□□□□ -1.62
COL21A1Q96P44 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 AC073869.10-201ENST00000642016 354 ntBASIC4.91□□□□□ -1.62
COL21A1Q96P44 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL21A1Q96P44 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.91□□□□□ -1.62
COL21A1Q96P44 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL21A1Q96P44 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.9□□□□□ -1.62
COL21A1Q96P44 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
COL21A1Q96P44 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL21A1Q96P44 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.9□□□□□ -1.62
COL21A1Q96P44 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
COL21A1Q96P44 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
COL21A1Q96P44 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.9□□□□□ -1.62
COL21A1Q96P44 OR55B1P-203ENST00000641518 2602 ntBASIC4.9□□□□□ -1.62
COL21A1Q96P44 RNA5SP183-201ENST00000362452 119 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 RNA5SP223-201ENST00000365174 120 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL21A1Q96P44 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 SLC35E1P1-201ENST00000419313 864 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 AC093655.2-201ENST00000425735 631 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 RPL34P6-201ENST00000432390 345 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 GAPDHP58-201ENST00000438477 1006 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 DNAJB5P1-201ENST00000454004 806 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 NIFKP7-201ENST00000503365 834 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 AC138409.2-202ENST00000507274 458 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 RNU6-941P-201ENST00000516346 108 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 RN7SL708P-201ENST00000580952 299 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 AC009597.2-201ENST00000604659 592 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 AL162431.4-201ENST00000604674 411 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 AL161912.3-201ENST00000605404 628 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 MIR6886-201ENST00000619864 61 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 AP000648.2-201ENST00000624182 404 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL21A1Q96P44 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL21A1Q96P44 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL21A1Q96P44 ZNF652P1-201ENST00000442420 1309 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
COL21A1Q96P44 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
COL21A1Q96P44 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 AP001642.1-201ENST00000624727 2117 ntBASIC4.9□□□□□ -1.63
COL21A1Q96P44 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COL21A1Q96P44 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL21A1Q96P44 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
COL21A1Q96P44 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL21A1Q96P44 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COL21A1Q96P44 AC005294.1-201ENST00000355509 281 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COL21A1Q96P44 MIR1286-201ENST00000408112 78 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 RPL35AP24-201ENST00000413846 330 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 Z68694.1-201ENST00000413929 841 ntBASIC4.89□□□□□ -1.63
COL21A1Q96P44 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms