Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SAMMSON-227ENST00000642114 1199 ntBASIC5.41□□□□□ -1.54
RPRD1AQ96P16 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RPRD1AQ96P16 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RPRD1AQ96P16 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RPRD1AQ96P16 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.41□□□□□ -1.54
RPRD1AQ96P16 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RPRD1AQ96P16 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
RPRD1AQ96P16 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RPRD1AQ96P16 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
RPRD1AQ96P16 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RPRD1AQ96P16 AC005005.4-201ENST00000623789 16698 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AL589994.1-201ENST00000404962 340 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 RN7SKP273-201ENST00000411392 314 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 SETP15-201ENST00000412724 337 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 RPL7AP49-201ENST00000429522 581 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AL591438.1-201ENST00000433508 581 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 RPL19P16-201ENST00000433839 588 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 NPM1P18-201ENST00000434232 732 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AL161722.2-201ENST00000434731 981 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 RPS29P10-201ENST00000439197 166 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AC016772.1-201ENST00000444170 1261 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 EEF1B2P5-201ENST00000444820 548 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 RN7SL189P-201ENST00000468631 289 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 RN7SL727P-201ENST00000482164 296 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 RPL15P21-201ENST00000495592 567 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AC008638.1-201ENST00000506035 866 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AC022832.1-201ENST00000530718 645 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AC134349.2-201ENST00000535136 910 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 SETP1-201ENST00000556014 845 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AC013244.1-201ENST00000604279 193 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AC087468.1-201ENST00000604365 630 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AL121612.2-201ENST00000612261 482 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AC073575.2-201ENST00000614212 627 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 AC135068.12-201ENST00000637370 931 ntBASIC5.4□□□□□ -1.54
RPRD1AQ96P16 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RPRD1AQ96P16 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.4□□□□□ -1.55
RPRD1AQ96P16 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RPRD1AQ96P16 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.4□□□□□ -1.55
RPRD1AQ96P16 AC104260.2-201ENST00000623551 3497 ntBASIC5.4□□□□□ -1.55
RPRD1AQ96P16 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RPRD1AQ96P16 AC083843.2-201ENST00000568248 6253 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AC023421.1-201ENST00000590535 1785 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AL031595.2-201ENST00000624215 19071 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 U3.3-201ENST00000362986 216 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 RNA5SP90-201ENST00000364801 99 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 MIR589-201ENST00000385238 99 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 NPM1P22-201ENST00000427761 952 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AL627308.1-201ENST00000435693 821 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 ARAFP2-201ENST00000440565 559 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 NOP56P2-201ENST00000447491 769 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 DNAJB5P1-201ENST00000454004 806 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AC006427.1-201ENST00000514359 712 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 EIF3KP3-201ENST00000514461 639 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AC234775.3-201ENST00000564612 656 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 RN7SL708P-201ENST00000580952 299 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AC008814.1-201ENST00000603797 406 ntBASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.39□□□□□ -1.55
RPRD1AQ96P16 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms