Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC7.12□□□□□ -1.27
CCDC7Q96M83 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.12□□□□□ -1.27
CCDC7Q96M83 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC7.12□□□□□ -1.27
CCDC7Q96M83 AC087360.1-201ENST00000518788 616 ntBASIC7.12□□□□□ -1.27
CCDC7Q96M83 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC7Q96M83 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.12□□□□□ -1.27
CCDC7Q96M83 AC093799.2-201ENST00000610062 578 ntBASIC7.12□□□□□ -1.27
CCDC7Q96M83 AL627230.1-201ENST00000613077 211 ntBASIC7.12□□□□□ -1.27
CCDC7Q96M83 AL591926.8-201ENST00000616876 211 ntBASIC7.12□□□□□ -1.27
CCDC7Q96M83 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.12□□□□□ -1.27
CCDC7Q96M83 SAMMSON-210ENST00000641260 1308 ntBASIC7.12□□□□□ -1.27
CCDC7Q96M83 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC7Q96M83 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
CCDC7Q96M83 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC7Q96M83 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC7Q96M83 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.12□□□□□ -1.27
CCDC7Q96M83 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC7Q96M83 MAPK10-328ENST00000641553 4009 ntBASIC7.12□□□□□ -1.27
CCDC7Q96M83 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC7Q96M83 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
CCDC7Q96M83 AC004158.1-201ENST00000564508 4319 ntBASIC7.12□□□□□ -1.27
CCDC7Q96M83 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC7Q96M83 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC7Q96M83 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
CCDC7Q96M83 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC7Q96M83 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC7.11□□□□□ -1.27
CCDC7Q96M83 HSPA8P14-201ENST00000552265 1805 ntBASIC7.11□□□□□ -1.27
CCDC7Q96M83 SNORA2.3-201ENST00000383920 135 ntBASIC7.11□□□□□ -1.27
CCDC7Q96M83 AC016397.1-201ENST00000412463 242 ntBASIC7.11□□□□□ -1.27
CCDC7Q96M83 DDX39BP1-205ENST00000422507 192 ntBASIC7.11□□□□□ -1.27
CCDC7Q96M83 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC7.11□□□□□ -1.27
CCDC7Q96M83 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.11□□□□□ -1.27
CCDC7Q96M83 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC7.11□□□□□ -1.27
CCDC7Q96M83 FTH1P2-201ENST00000466086 412 ntBASIC7.11□□□□□ -1.27
CCDC7Q96M83 AC097484.1-201ENST00000471148 389 ntBASIC7.11□□□□□ -1.27
CCDC7Q96M83 RN7SL346P-201ENST00000491561 294 ntBASIC7.11□□□□□ -1.27
CCDC7Q96M83 AC005000.1-201ENST00000536192 288 ntBASIC7.11□□□□□ -1.27
CCDC7Q96M83 AL512310.9-201ENST00000553311 948 ntBASIC7.11□□□□□ -1.27
CCDC7Q96M83 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC7.11□□□□□ -1.27
CCDC7Q96M83 AC018695.5-201ENST00000605872 315 ntBASIC7.11□□□□□ -1.27
CCDC7Q96M83 MIR378J-201ENST00000611988 109 ntBASIC7.11□□□□□ -1.27
CCDC7Q96M83 CASC19-221ENST00000641309 1382 ntBASIC7.11□□□□□ -1.27
CCDC7Q96M83 OR9K1P-202ENST00000641111 3217 ntBASIC7.11□□□□□ -1.27
CCDC7Q96M83 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
CCDC7Q96M83 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
CCDC7Q96M83 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC7Q96M83 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 AC010132.2-201ENST00000295493 1043 ntBASIC7.1□□□□□ -1.27
CCDC7Q96M83 SNORA77-201ENST00000408716 125 ntBASIC7.1□□□□□ -1.27
CCDC7Q96M83 RPL34P20-201ENST00000442771 351 ntBASIC7.1□□□□□ -1.27
CCDC7Q96M83 RPS17P2-201ENST00000461663 408 ntBASIC7.1□□□□□ -1.27
CCDC7Q96M83 DEFB109A-201ENST00000482450 265 ntBASIC7.1□□□□□ -1.27
CCDC7Q96M83 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 EDDM3DP-201ENST00000554692 434 ntBASIC7.1□□□□□ -1.27
CCDC7Q96M83 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 AC012557.1-201ENST00000607115 611 ntBASIC7.1□□□□□ -1.27
CCDC7Q96M83 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 AC015660.5-201ENST00000623238 564 ntBASIC7.1□□□□□ -1.27
CCDC7Q96M83 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC7Q96M83 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC7Q96M83 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC7Q96M83 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
CCDC7Q96M83 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
CCDC7Q96M83 AL353625.1-202ENST00000366273 571 ntBASIC7.09□□□□□ -1.27
CCDC7Q96M83 MIR192-201ENST00000384915 110 ntBASIC7.09□□□□□ -1.27
CCDC7Q96M83 MIR600-201ENST00000385007 98 ntBASIC7.09□□□□□ -1.27
CCDC7Q96M83 RN7SKP114-201ENST00000410327 279 ntBASIC7.09□□□□□ -1.27
CCDC7Q96M83 COX6B1P1-201ENST00000415962 213 ntBASIC7.09□□□□□ -1.27
CCDC7Q96M83 AL590139.1-201ENST00000416267 400 ntBASIC7.09□□□□□ -1.27
CCDC7Q96M83 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC7Q96M83 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC7Q96M83 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC7Q96M83 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC7Q96M83 TPT1P13-201ENST00000449760 499 ntBASIC7.09□□□□□ -1.27
CCDC7Q96M83 RN7SL738P-201ENST00000470264 297 ntBASIC7.09□□□□□ -1.27
CCDC7Q96M83 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC7Q96M83 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC7Q96M83 AL671862.1-201ENST00000515851 349 ntBASIC7.09□□□□□ -1.27
CCDC7Q96M83 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC7.09□□□□□ -1.27
CCDC7Q96M83 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.09□□□□□ -1.27
CCDC7Q96M83 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC7Q96M83 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.27
CCDC7Q96M83 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.09□□□□□ -1.27
CCDC7Q96M83 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC7.09□□□□□ -1.27
CCDC7Q96M83 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC7Q96M83 AC234771.5-201ENST00000600161 514 ntBASIC7.09□□□□□ -1.27
CCDC7Q96M83 EIF3FP1-201ENST00000613970 806 ntBASIC7.09□□□□□ -1.27
CCDC7Q96M83 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
CCDC7Q96M83 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC7Q96M83 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
CCDC7Q96M83 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms