Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NAP1L4P2-201ENST00000425958 899 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 MTND2P2-201ENST00000434633 945 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 CYCSP11-201ENST00000436426 315 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AP000936.3-201ENST00000438127 255 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AL161636.2-201ENST00000445179 927 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AL591363.1-201ENST00000450091 483 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AC007688.1-201ENST00000475592 759 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AC058823.1-201ENST00000485315 474 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 RN7SL423P-201ENST00000486202 304 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 PPIAP19-201ENST00000486414 492 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 YWHABP2-201ENST00000540201 713 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 LSM3P2-201ENST00000551246 273 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AC040958.1-201ENST00000561102 201 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AC010487.1-201ENST00000594408 1172 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AC005252.1-201ENST00000604518 1063 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AL162431.4-201ENST00000604674 411 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 RN7SL787P-201ENST00000613000 284 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AC138965.3-201ENST00000623875 498 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AC133552.1-201ENST00000569988 4007 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 RNA5SP234-201ENST00000363916 119 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 MIR1282-201ENST00000408865 101 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AL512504.1-201ENST00000415494 778 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 RPS26P13-201ENST00000419030 330 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AC007563.3-201ENST00000433233 371 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 CACYBPP1-201ENST00000438592 684 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 RPL5P13-201ENST00000462840 709 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 RN7SL51P-201ENST00000468230 285 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 HMGB1P47-201ENST00000511281 589 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 RNU6-491P-201ENST00000516099 110 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 MTCYBP19-201ENST00000517463 1124 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AC026616.1-201ENST00000523157 525 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AC022404.1-201ENST00000555320 273 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 MIR3614-201ENST00000581261 86 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AC068020.1-201ENST00000594215 661 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AC245128.3-201ENST00000594721 748 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AC130352.1-201ENST00000602979 661 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AP004372.1-201ENST00000604842 844 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AC016911.1-201ENST00000613297 452 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AC091932.2-201ENST00000623014 291 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 AP002967.1-201ENST00000624203 539 ntBASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDLIM5Q96HC4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms