Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CR848007.2-201ENST00000424918 787 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 CBX1P2-201ENST00000453841 458 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 TPT1P1-201ENST00000458495 518 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 ABCC13-202ENST00000463099 3842 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 PSAT1P4-201ENST00000466500 526 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC009120.1-201ENST00000493458 473 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 OR5H7P-201ENST00000514084 930 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 RNA5SP438-201ENST00000516561 112 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 AL390726.5-202ENST00000564800 256 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC018552.3-201ENST00000567416 561 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 VN1R84P-201ENST00000593697 235 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 AL138895.2-201ENST00000603019 178 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC007423.1-201ENST00000605009 627 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC015849.2-201ENST00000605738 409 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC242628.1-201ENST00000606810 391 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC010632.3-201ENST00000611377 369 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC004808.2-201ENST00000627965 773 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC011755.1-201ENST00000623763 2049 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC091305.2-201ENST00000624049 1576 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC079097.1-201ENST00000512187 1399 ntBASIC5.04□□□□□ -1.6
PTP4A1Q93096 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 AL359715.3-201ENST00000569267 2123 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PTP4A1Q93096 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 AC025574.1-201ENST00000554784 1653 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 DDX18P3-201ENST00000404856 2007 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 AC021242.1-201ENST00000507315 2035 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 AL118496.1-201ENST00000440201 1812 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PTP4A1Q93096 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 RNA5SP273-201ENST00000362484 113 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 RNA5SP477-201ENST00000362639 119 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTP4A1Q93096 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 CCNB2P1-201ENST00000399411 1150 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 RPS27AP11-201ENST00000402798 447 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 OR13Z1P-201ENST00000416141 834 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 RIMKLBP2-201ENST00000424737 654 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 AC126120.1-201ENST00000431082 470 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 RPL34P26-201ENST00000445636 354 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTP4A1Q93096 RPL32P33-201ENST00000487023 394 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 AC005912.1-201ENST00000495392 255 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 RN7SL591P-201ENST00000496150 292 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 Y_RNA.667-201ENST00000516212 107 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 SCARNA6.1-201ENST00000516989 238 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 SMARCE1P4-201ENST00000523647 241 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 TRIM77BP-201ENST00000524985 1119 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 HSPE1P2-201ENST00000554777 306 ntBASIC5.03□□□□□ -1.6
PTP4A1Q93096 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTP4A1Q93096 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PTP4A1Q93096 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.03□□□□□ -1.6
PTP4A1Q93096 AC063977.5-201ENST00000601044 974 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms