Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 RBM22P1-201ENST00000578589 1214 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AC074101.1-201ENST00000637861 241 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AC007996.1-201ENST00000620414 2821 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AC027279.1-201ENST00000568885 4284 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 AP001642.1-201ENST00000624727 2117 ntBASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RTN4IP1Q8WWV3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC011447.7-201ENST00000624228 1590 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 RNU6-249P-201ENST00000363016 102 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 RNU1-77P-201ENST00000390868 162 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AL050305.1-201ENST00000399993 1230 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AL035079.1-201ENST00000405210 287 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AL390316.1-201ENST00000406279 553 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AL133325.1-201ENST00000421090 382 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC009238.2-201ENST00000431026 355 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 RPL34P6-201ENST00000432390 345 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 CYCSP6-201ENST00000434498 302 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 BTF3P6-201ENST00000448054 499 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC007386.1-201ENST00000455212 582 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC108161.1-201ENST00000461060 402 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 RN7SL174P-201ENST00000475578 289 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 RPL7P40-201ENST00000481703 745 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 RN7SL184P-201ENST00000488308 297 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 RPEP1-201ENST00000504507 658 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 RNA5SP362-201ENST00000516048 118 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 IGLVIV-64-201ENST00000518581 301 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 YWHABP2-201ENST00000540201 713 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AL122125.1-201ENST00000616999 600 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC005840.5-201ENST00000619166 599 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 MTCO1P1-201ENST00000624263 1081 ntBASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RTN4IP1Q8WWV3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 RNA5SP435-201ENST00000364044 108 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 RNA5SP132-201ENST00000364725 118 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 MIR105-1-201ENST00000385222 81 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 RNA5SP339-201ENST00000390987 122 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 AC009804.1-201ENST00000400949 179 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 OR4K12P-201ENST00000406538 961 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 OR3A2-201ENST00000408891 1076 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 SETP15-201ENST00000412724 337 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 CBX1P3-201ENST00000413296 527 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 SMC4P1-201ENST00000414479 527 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 AL121776.1-201ENST00000429337 372 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 AL133445.1-201ENST00000467051 452 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 OR11I1P-201ENST00000486033 954 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 AC006427.1-201ENST00000514359 712 ntBASIC4.31□□□□□ -1.72
RTN4IP1Q8WWV3 RNA5SP303-201ENST00000516192 130 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms