Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 OR51K1P-201ENST00000510214 950 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AC110775.1-201ENST00000513721 462 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AC034244.2-201ENST00000514668 858 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 MIR4433B-201ENST00000581329 102 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AL356608.1-201ENST00000610034 820 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 AL355974.3-201ENST00000617383 467 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 LINC01739-205ENST00000641890 573 ntBASIC6.04□□□□□ -1.44
HERC6Q8IVU3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
HERC6Q8IVU3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AP002512.4-202ENST00000641599 4530 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 RNU1-43P-201ENST00000365052 165 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 RNU11-201ENST00000387069 134 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 FABP12P1-201ENST00000401911 322 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 DUTP5-201ENST00000406790 469 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 RNU2-22P-201ENST00000411266 212 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC093162.1-201ENST00000419682 124 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AL365220.1-201ENST00000432923 399 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 GYG1P1-201ENST00000460864 698 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 FTH1P2-201ENST00000466086 412 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC112206.4-201ENST00000515142 405 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC103833.1-201ENST00000517442 172 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 HMGN2P47-201ENST00000559378 272 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 FAM106CP-201ENST00000582212 507 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 MIR4480-201ENST00000582492 71 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AL360012.1-201ENST00000602813 131 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 MTCO3P22-201ENST00000603219 784 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC093388.1-201ENST00000609166 430 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC025574.2-201ENST00000615621 514 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC025016.1-201ENST00000616746 682 ntBASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.03□□□□□ -1.44
HERC6Q8IVU3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
HERC6Q8IVU3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 AC232271.1-201ENST00000602455 2715 ntBASIC6.02□□□□□ -1.45
HERC6Q8IVU3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
HERC6Q8IVU3 MIR133B-201ENST00000362210 119 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms