Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 BUD31P2-201ENST00000449374 300 ntBASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AL445665.1-202ENST00000452436 324 ntBASIC5.71□□□□□ -1.5
RFX6Q8HWS3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AC105918.1-201ENST00000474399 838 ntBASIC5.71□□□□□ -1.5
RFX6Q8HWS3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AC021106.1-201ENST00000509020 1058 ntBASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AC091912.1-201ENST00000511351 248 ntBASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AC008147.3-201ENST00000548666 354 ntBASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AC008126.1-201ENST00000549019 480 ntBASIC5.71□□□□□ -1.5
RFX6Q8HWS3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AC013244.3-201ENST00000605614 388 ntBASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AC015849.2-201ENST00000605738 409 ntBASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 AC016745.2-201ENST00000608834 3443 ntBASIC5.71□□□□□ -1.5
RFX6Q8HWS3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RFX6Q8HWS3 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 YES1P1-201ENST00000418510 1628 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 SLC20A1P1-201ENST00000413906 956 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 RPS3P2-201ENST00000421346 701 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 BX119321.1-201ENST00000428912 797 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AL450996.1-201ENST00000445574 1202 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 EEF1B2P6-201ENST00000445713 673 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 PFN1P8-201ENST00000497012 543 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AC093770.1-201ENST00000511559 571 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 MTCO3P27-201ENST00000514397 196 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 CYCSP22-201ENST00000517555 339 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AC026407.1-201ENST00000518369 204 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 NANOGNBP2-201ENST00000544753 553 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 MTND1P24-201ENST00000552175 861 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AC009237.13-201ENST00000603193 276 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 MIR8084-201ENST00000614105 89 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AL162574.1-201ENST00000615702 950 ntBASIC5.7□□□□□ -1.5
RFX6Q8HWS3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX6Q8HWS3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
RFX6Q8HWS3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
RFX6Q8HWS3 AC106754.1-201ENST00000562632 1513 ntBASIC5.69□□□□□ -1.5
RFX6Q8HWS3 AP001029.2-203ENST00000589795 4910 ntBASIC5.69□□□□□ -1.5
RFX6Q8HWS3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
RFX6Q8HWS3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFX6Q8HWS3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms