Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 RPS26P47-201ENST00000427219 348 ntBASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 MTCO3P21-201ENST00000430791 643 ntBASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 MTCYBP12-201ENST00000440559 1134 ntBASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 RN7SL273P-201ENST00000481561 299 ntBASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 ATP5LP5-201ENST00000483050 299 ntBASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 AC068714.1-201ENST00000559623 800 ntBASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 DHFRP1-201ENST00000579682 559 ntBASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 RN7SL787P-201ENST00000613000 284 ntBASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 AC008115.3-201ENST00000614874 549 ntBASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 AC103703.1-201ENST00000634783 663 ntBASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 ZNF733P-202ENST00000444809 1573 ntBASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 AC024341.1-201ENST00000526444 1552 ntBASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NUP54Q7Z3B4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 DDX18P3-201ENST00000404856 2007 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 YES1P1-201ENST00000418510 1628 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 SRRM1P3-201ENST00000426911 2678 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 RN7SKP286-201ENST00000410894 299 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 RN7SKP293-201ENST00000411389 296 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC096921.1-201ENST00000411661 375 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 RPL26P37-201ENST00000411983 438 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 TMEM183AP1-205ENST00000432739 290 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AL157827.1-201ENST00000447622 132 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 RPS23P9-201ENST00000448848 438 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC016724.1-201ENST00000453215 421 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 YWHAEP1-201ENST00000453697 763 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 SETP20-201ENST00000457046 852 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 MRE11P1-201ENST00000464884 2127 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 RN7SL197P-201ENST00000466981 299 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 RPS17P5-201ENST00000498293 408 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 DUTP7-201ENST00000507982 486 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC138866.2-201ENST00000508650 584 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 IGLVIV-64-201ENST00000518581 301 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 NRBF2P4-201ENST00000520874 850 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC137627.1-201ENST00000545761 289 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 HSPE1P2-201ENST00000554777 306 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AL139407.1-201ENST00000613826 1175 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 RNA5SP439-201ENST00000617595 124 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 CU639417.4-201ENST00000623928 207 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC114786.1-201ENST00000512892 1415 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC087516.1-201ENST00000561236 2428 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC104118.1-201ENST00000607625 1589 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 AC004076.2-201ENST00000620532 3323 ntBASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUP54Q7Z3B4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms