Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF43Q68DV7 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF43Q68DV7 TMCC1P1-201ENST00000518897 1980 ntBASIC6.98□□□□□ -1.29
RNF43Q68DV7 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF43Q68DV7 OR52B5P-204ENST00000641744 3467 ntBASIC6.98□□□□□ -1.29
RNF43Q68DV7 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF43Q68DV7 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
RNF43Q68DV7 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
RNF43Q68DV7 AL136531.3-201ENST00000624378 3658 ntBASIC6.98□□□□□ -1.29
RNF43Q68DV7 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF43Q68DV7 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF43Q68DV7 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF43Q68DV7 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF43Q68DV7 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF43Q68DV7 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF43Q68DV7 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF43Q68DV7 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF43Q68DV7 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF43Q68DV7 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AL132640.2-201ENST00000559968 1698 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 OR56B2P-201ENST00000317102 954 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 SNORD115-47-201ENST00000391226 86 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AL356057.2-201ENST00000403318 432 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 CEACAMP8-201ENST00000413902 580 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 EIF4A1P1-201ENST00000420241 934 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 MTND5P14-201ENST00000441481 1267 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 ST13P20-201ENST00000447996 1065 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 MTCYBP17-201ENST00000503579 789 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 CENPUP1-201ENST00000526649 1202 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 CTSLP2-201ENST00000580501 394 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 RPL29P33-201ENST00000587474 316 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 DYNLL1P1-201ENST00000595442 269 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC091133.5-201ENST00000603088 301 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC012368.3-201ENST00000604190 219 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC090578.1-201ENST00000604955 591 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC073137.1-201ENST00000605636 634 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC093838.1-201ENST00000613014 469 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC025594.3-201ENST00000613068 790 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC097641.3-201ENST00000613523 464 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC089999.3-201ENST00000622440 577 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC120057.5-201ENST00000623840 154 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 AC073869.7-201ENST00000640874 297 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF43Q68DV7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 SNX18P3-202ENST00000565670 1750 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF43Q68DV7 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 AL929601.4-201ENST00000613011 1341 ntBASIC6.97□□□□□ -1.29
RNF43Q68DV7 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF43Q68DV7 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
RNF43Q68DV7 PARP4P1-201ENST00000435945 2337 ntBASIC6.96□□□□□ -1.29
RNF43Q68DV7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF43Q68DV7 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF43Q68DV7 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.96□□□□□ -1.29
RNF43Q68DV7 AC010132.4-201ENST00000569883 1368 ntBASIC6.96□□□□□ -1.29
RNF43Q68DV7 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF43Q68DV7 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
RNF43Q68DV7 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF43Q68DV7 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.29
RNF43Q68DV7 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF43Q68DV7 MAPK10-357ENST00000641831 2858 ntBASIC6.96□□□□□ -1.29
RNF43Q68DV7 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
RNF43Q68DV7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RNF43Q68DV7 OLMALINC-203ENST00000641087 3779 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms