Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 AL354696.1-201ENST00000614652 497 ntBASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 AC087385.3-201ENST00000620477 187 ntBASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 CCAT2-201ENST00000630920 1752 ntBASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 AC087565.3-202ENST00000642085 1603 ntBASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 AC011933.2-201ENST00000578539 2790 ntBASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LYSMD4Q5XG99 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 RNA5SP87-201ENST00000384155 118 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 MIR192-201ENST00000384915 110 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AC019070.1-201ENST00000415008 1024 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 TRIM60P17-201ENST00000415181 719 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 DDX39BP1-205ENST00000422507 192 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 TPRKBP1-201ENST00000456243 481 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 RPL7P16-201ENST00000479738 738 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AL671862.1-201ENST00000515851 349 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AP002981.1-201ENST00000517692 975 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 SEC11B-201ENST00000518383 499 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AC012400.1-201ENST00000518452 381 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 RN7SL356P-201ENST00000582228 248 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 MIR378J-201ENST00000611988 109 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AC015660.5-201ENST00000623238 564 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AC112694.2-201ENST00000623697 768 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AC092747.4-201ENST00000620519 1861 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 ZNF402P-201ENST00000404435 3100 ntBASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
LYSMD4Q5XG99 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AC003985.2-201ENST00000562268 1669 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 OR10AB1P-202ENST00000641219 1686 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 SCARNA15-201ENST00000607520 4325 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 RN7SKP149-201ENST00000363008 344 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 RNA5SP455-201ENST00000365190 119 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 GAPDHP15-201ENST00000398586 975 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 RPS4XP9-201ENST00000405151 780 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 RPL23AP18-201ENST00000416139 468 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 OR10T1P-201ENST00000424327 947 ntBASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.24□□□□□ -1.57
LYSMD4Q5XG99 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms