Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.38□□□□□ -1.71
USF2Q15853 OR52E3P-201ENST00000452083 936 ntBASIC4.38□□□□□ -1.71
USF2Q15853 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.38□□□□□ -1.71
USF2Q15853 PSAT1P4-201ENST00000466500 526 ntBASIC4.38□□□□□ -1.71
USF2Q15853 RN7SL214P-201ENST00000487317 265 ntBASIC4.38□□□□□ -1.71
USF2Q15853 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.38□□□□□ -1.71
USF2Q15853 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.38□□□□□ -1.71
USF2Q15853 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.38□□□□□ -1.71
USF2Q15853 HMGN2P36-201ENST00000529541 409 ntBASIC4.38□□□□□ -1.71
USF2Q15853 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
USF2Q15853 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.38□□□□□ -1.71
USF2Q15853 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.38□□□□□ -1.71
USF2Q15853 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.38□□□□□ -1.71
USF2Q15853 AC079905.1-201ENST00000549280 475 ntBASIC4.38□□□□□ -1.71
USF2Q15853 AC068714.1-201ENST00000559623 800 ntBASIC4.38□□□□□ -1.71
USF2Q15853 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.38□□□□□ -1.71
USF2Q15853 AGGF1P7-201ENST00000562369 913 ntBASIC4.38□□□□□ -1.71
USF2Q15853 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.38□□□□□ -1.71
USF2Q15853 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.38□□□□□ -1.71
USF2Q15853 FAM27E4-201ENST00000605259 342 ntBASIC4.38□□□□□ -1.71
USF2Q15853 AL353600.1-201ENST00000608148 251 ntBASIC4.38□□□□□ -1.71
USF2Q15853 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.38□□□□□ -1.71
USF2Q15853 AC022106.2-201ENST00000620114 757 ntBASIC4.38□□□□□ -1.71
USF2Q15853 AC022919.1-201ENST00000624979 626 ntBASIC4.38□□□□□ -1.71
USF2Q15853 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USF2Q15853 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
USF2Q15853 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.38□□□□□ -1.71
USF2Q15853 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.38□□□□□ -1.71
USF2Q15853 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USF2Q15853 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USF2Q15853 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USF2Q15853 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USF2Q15853 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USF2Q15853 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
USF2Q15853 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.37□□□□□ -1.71
USF2Q15853 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.37□□□□□ -1.71
USF2Q15853 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
USF2Q15853 AC068870.1-201ENST00000563737 2455 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.37□□□□□ -1.71
USF2Q15853 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
USF2Q15853 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
USF2Q15853 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USF2Q15853 AC092079.1-201ENST00000558620 1985 ntBASIC4.37□□□□□ -1.71
USF2Q15853 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF2Q15853 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
USF2Q15853 TMSB4XP2-201ENST00000335179 210 ntBASIC4.37□□□□□ -1.71
USF2Q15853 RNA5SP273-201ENST00000362484 113 ntBASIC4.37□□□□□ -1.71
USF2Q15853 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF2Q15853 RPS24P12-201ENST00000402084 394 ntBASIC4.37□□□□□ -1.71
USF2Q15853 HSPD1P16-201ENST00000402302 394 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.37□□□□□ -1.71
USF2Q15853 RPL12P34-201ENST00000424532 479 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.37□□□□□ -1.71
USF2Q15853 AC007679.3-201ENST00000434035 414 ntBASIC4.37□□□□□ -1.71
USF2Q15853 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.37□□□□□ -1.71
USF2Q15853 NDUFS5P5-201ENST00000437256 321 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.37□□□□□ -1.71
USF2Q15853 LINC02210-201ENST00000444561 288 ntBASIC4.37□□□□□ -1.71
USF2Q15853 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.37□□□□□ -1.71
USF2Q15853 LDHBP2-201ENST00000456969 1005 ntBASIC4.37□□□□□ -1.71
USF2Q15853 SNORD125-201ENST00000459538 96 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.37□□□□□ -1.71
USF2Q15853 METTL15P1-201ENST00000481421 1045 ntBASIC4.37□□□□□ -1.71
USF2Q15853 RN7SL570P-201ENST00000484405 292 ntBASIC4.37□□□□□ -1.71
USF2Q15853 RPL32P33-201ENST00000487023 394 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AC073610.1-201ENST00000489971 396 ntBASIC4.37□□□□□ -1.71
USF2Q15853 LSM3P4-201ENST00000502948 309 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.37□□□□□ -1.71
USF2Q15853 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.37□□□□□ -1.71
USF2Q15853 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.37□□□□□ -1.71
USF2Q15853 TOMM20P1-201ENST00000534518 427 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.37□□□□□ -1.71
USF2Q15853 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.37□□□□□ -1.71
USF2Q15853 BNIP3P1-201ENST00000547295 580 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.37□□□□□ -1.71
USF2Q15853 MIR7853-201ENST00000584820 132 ntBASIC4.37□□□□□ -1.71
USF2Q15853 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USF2Q15853 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.37□□□□□ -1.71
USF2Q15853 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.37□□□□□ -1.71
USF2Q15853 AC010200.2-201ENST00000605098 235 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AL139124.1-201ENST00000609123 421 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AL592494.3-201ENST00000609485 464 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AC004948.1-201ENST00000609858 672 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AC010632.3-201ENST00000611377 369 ntBASIC4.37□□□□□ -1.71
USF2Q15853 AC090607.5-201ENST00000615692 224 ntBASIC4.37□□□□□ -1.71
USF2Q15853 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF2Q15853 AC015871.5-202ENST00000623252 701 ntBASIC4.37□□□□□ -1.71
USF2Q15853 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF2Q15853 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF2Q15853 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.37□□□□□ -1.71
USF2Q15853 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
USF2Q15853 OR4F13P-202ENST00000560066 2054 ntBASIC4.37□□□□□ -1.71
USF2Q15853 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
USF2Q15853 AL592182.3-201ENST00000642132 3304 ntBASIC4.37□□□□□ -1.71
USF2Q15853 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
USF2Q15853 AL672167.1-204ENST00000641875 3017 ntBASIC4.37□□□□□ -1.71
USF2Q15853 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.37□□□□□ -1.71
USF2Q15853 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
USF2Q15853 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USF2Q15853 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms