Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 BCAS2P1-201ENST00000528022 632 ntBASIC5.4□□□□□ -1.54
RAE1P78406 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.4□□□□□ -1.54
RAE1P78406 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.4□□□□□ -1.54
RAE1P78406 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.4□□□□□ -1.54
RAE1P78406 ZNF971P-201ENST00000562068 1249 ntBASIC5.4□□□□□ -1.54
RAE1P78406 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 COX6CP7-201ENST00000597056 208 ntBASIC5.4□□□□□ -1.54
RAE1P78406 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.4□□□□□ -1.54
RAE1P78406 Z82195.1-201ENST00000604558 398 ntBASIC5.4□□□□□ -1.54
RAE1P78406 AC079610.2-201ENST00000604818 690 ntBASIC5.4□□□□□ -1.54
RAE1P78406 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
RAE1P78406 MIR7109-201ENST00000613748 65 ntBASIC5.4□□□□□ -1.54
RAE1P78406 AC079395.3-201ENST00000615161 484 ntBASIC5.4□□□□□ -1.54
RAE1P78406 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.4□□□□□ -1.54
RAE1P78406 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RAE1P78406 AC004232.3-201ENST00000622977 525 ntBASIC5.4□□□□□ -1.54
RAE1P78406 AC104985.3-201ENST00000623479 597 ntBASIC5.4□□□□□ -1.54
RAE1P78406 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.4□□□□□ -1.54
RAE1P78406 OR8G3P-202ENST00000641572 1255 ntBASIC5.4□□□□□ -1.54
RAE1P78406 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.4□□□□□ -1.55
RAE1P78406 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAE1P78406 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.4□□□□□ -1.55
RAE1P78406 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAE1P78406 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RAE1P78406 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAE1P78406 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAE1P78406 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
RAE1P78406 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAE1P78406 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.4□□□□□ -1.55
RAE1P78406 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RAE1P78406 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAE1P78406 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAE1P78406 PWAR1-201ENST00000624188 2414 ntBASIC5.39□□□□□ -1.55
RAE1P78406 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAE1P78406 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
RAE1P78406 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAE1P78406 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.39□□□□□ -1.55
RAE1P78406 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAE1P78406 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAE1P78406 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RAE1P78406 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAE1P78406 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.39□□□□□ -1.55
RAE1P78406 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RAE1P78406 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAE1P78406 GAPDHP24-201ENST00000328713 983 ntBASIC5.39□□□□□ -1.55
RAE1P78406 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.39□□□□□ -1.55
RAE1P78406 SNORA64.1-201ENST00000362600 132 ntBASIC5.39□□□□□ -1.55
RAE1P78406 RN7SKP187-201ENST00000365536 330 ntBASIC5.39□□□□□ -1.55
RAE1P78406 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.39□□□□□ -1.55
RAE1P78406 RNU6-906P-201ENST00000384700 70 ntBASIC5.39□□□□□ -1.55
RAE1P78406 ATP5HP3-201ENST00000396994 486 ntBASIC5.39□□□□□ -1.55
RAE1P78406 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.39□□□□□ -1.55
RAE1P78406 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.39□□□□□ -1.55
RAE1P78406 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.39□□□□□ -1.55
RAE1P78406 AK4P4-201ENST00000419465 646 ntBASIC5.39□□□□□ -1.55
RAE1P78406 AL035660.1-201ENST00000422041 222 ntBASIC5.39□□□□□ -1.55
RAE1P78406 SETP9-201ENST00000423837 832 ntBASIC5.39□□□□□ -1.55
RAE1P78406 AL035458.1-201ENST00000433096 585 ntBASIC5.39□□□□□ -1.55
RAE1P78406 MTCO2P20-201ENST00000437339 673 ntBASIC5.39□□□□□ -1.55
RAE1P78406 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.39□□□□□ -1.55
RAE1P78406 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.39□□□□□ -1.55
RAE1P78406 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.39□□□□□ -1.55
RAE1P78406 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.39□□□□□ -1.55
RAE1P78406 AC019084.1-201ENST00000457337 432 ntBASIC5.39□□□□□ -1.55
RAE1P78406 AC098583.1-201ENST00000480875 255 ntBASIC5.39□□□□□ -1.55
RAE1P78406 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.39□□□□□ -1.55
RAE1P78406 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.39□□□□□ -1.55
RAE1P78406 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.39□□□□□ -1.55
RAE1P78406 AC024405.1-201ENST00000532521 1042 ntBASIC5.39□□□□□ -1.55
RAE1P78406 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.39□□□□□ -1.55
RAE1P78406 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.39□□□□□ -1.55
RAE1P78406 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAE1P78406 AL049870.4-201ENST00000555741 486 ntBASIC5.39□□□□□ -1.55
RAE1P78406 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.39□□□□□ -1.55
RAE1P78406 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAE1P78406 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.39□□□□□ -1.55
RAE1P78406 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.39□□□□□ -1.55
RAE1P78406 AC012254.4-201ENST00000588843 273 ntBASIC5.39□□□□□ -1.55
RAE1P78406 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.39□□□□□ -1.55
RAE1P78406 AC097478.2-201ENST00000610572 514 ntBASIC5.39□□□□□ -1.55
RAE1P78406 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.39□□□□□ -1.55
RAE1P78406 MTND2P41-201ENST00000637599 773 ntBASIC5.39□□□□□ -1.55
RAE1P78406 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RAE1P78406 AC140134.1-201ENST00000511830 3544 ntBASIC5.39□□□□□ -1.55
RAE1P78406 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAE1P78406 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.39□□□□□ -1.55
RAE1P78406 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RAE1P78406 AC018809.2-201ENST00000602436 3823 ntBASIC5.39□□□□□ -1.55
RAE1P78406 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
RAE1P78406 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.39□□□□□ -1.55
RAE1P78406 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.39□□□□□ -1.55
RAE1P78406 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RAE1P78406 AC130360.2-201ENST00000533477 1556 ntBASIC5.38□□□□□ -1.55
RAE1P78406 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.38□□□□□ -1.55
RAE1P78406 CASC19-260ENST00000641828 2001 ntBASIC5.38□□□□□ -1.55
RAE1P78406 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAE1P78406 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RAE1P78406 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms