Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC021106.1-201ENST00000509020 1058 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AC091912.1-201ENST00000511351 248 ntBASIC5.01□□□□□ -1.61
CDH11P55287 RNU6-615P-201ENST00000516065 106 ntBASIC5.01□□□□□ -1.61
CDH11P55287 IGLV3-24-201ENST00000517477 197 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH11P55287 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH11P55287 HMGB1P42-201ENST00000532126 553 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AC092451.2-201ENST00000538746 658 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH11P55287 CKS1BP1-201ENST00000555221 240 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AC007225.2-201ENST00000562529 256 ntBASIC5.01□□□□□ -1.61
CDH11P55287 MIR4505-201ENST00000582238 73 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH11P55287 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.01□□□□□ -1.61
CDH11P55287 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH11P55287 AC006272.2-201ENST00000594725 163 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.01□□□□□ -1.61
CDH11P55287 AL133247.2-201ENST00000603236 482 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AC104695.2-201ENST00000605056 775 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH11P55287 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH11P55287 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
CDH11P55287 AC006249.1-201ENST00000621223 471 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH11P55287 uc_338.7-201ENST00000621834 124 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AC079298.2-201ENST00000623885 459 ntBASIC5.01□□□□□ -1.61
CDH11P55287 FRG1EP-201ENST00000634469 770 ntBASIC5.01□□□□□ -1.61
CDH11P55287 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH11P55287 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH11P55287 MUC2-202ENST00000613187 4845 ntBASIC5.01□□□□□ -1.61
CDH11P55287 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.01□□□□□ -1.61
CDH11P55287 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH11P55287 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH11P55287 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.01□□□□□ -1.61
CDH11P55287 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH11P55287 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH11P55287 OR9K1P-202ENST00000641111 3217 ntBASIC5.01□□□□□ -1.61
CDH11P55287 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5□□□□□ -1.61
CDH11P55287 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CDH11P55287 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CDH11P55287 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 PHACTR2P1-201ENST00000605639 1414 ntBASIC5□□□□□ -1.61
CDH11P55287 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5□□□□□ -1.61
CDH11P55287 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5□□□□□ -1.61
CDH11P55287 GAPDHP24-201ENST00000328713 983 ntBASIC5□□□□□ -1.61
CDH11P55287 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5□□□□□ -1.61
CDH11P55287 AL159987.1-201ENST00000347911 293 ntBASIC5□□□□□ -1.61
CDH11P55287 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5□□□□□ -1.61
CDH11P55287 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 PPIAP9-201ENST00000403866 498 ntBASIC5□□□□□ -1.61
CDH11P55287 RMRPP5-201ENST00000411156 267 ntBASIC5□□□□□ -1.61
CDH11P55287 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5□□□□□ -1.61
CDH11P55287 EEF1A1P29-201ENST00000416082 1096 ntBASIC5□□□□□ -1.61
CDH11P55287 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5□□□□□ -1.61
CDH11P55287 SCAND3P1-201ENST00000439854 1060 ntBASIC5□□□□□ -1.61
CDH11P55287 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5□□□□□ -1.61
CDH11P55287 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5□□□□□ -1.61
CDH11P55287 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5□□□□□ -1.61
CDH11P55287 GOLGA5P1-201ENST00000507317 980 ntBASIC5□□□□□ -1.61
CDH11P55287 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 AC138866.2-201ENST00000508650 584 ntBASIC5□□□□□ -1.61
CDH11P55287 AC027338.1-201ENST00000514840 825 ntBASIC5□□□□□ -1.61
CDH11P55287 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5□□□□□ -1.61
CDH11P55287 SCARNA6.1-201ENST00000516989 238 ntBASIC5□□□□□ -1.61
CDH11P55287 AC021678.3-201ENST00000517893 476 ntBASIC5□□□□□ -1.61
CDH11P55287 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5□□□□□ -1.61
CDH11P55287 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5□□□□□ -1.61
CDH11P55287 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5□□□□□ -1.61
CDH11P55287 AC125612.1-201ENST00000547580 377 ntBASIC5□□□□□ -1.61
CDH11P55287 AL049872.1-201ENST00000556323 322 ntBASIC5□□□□□ -1.61
CDH11P55287 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5□□□□□ -1.61
CDH11P55287 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5□□□□□ -1.61
CDH11P55287 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5□□□□□ -1.61
CDH11P55287 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5□□□□□ -1.61
CDH11P55287 FO393422.1-201ENST00000603908 708 ntBASIC5□□□□□ -1.61
CDH11P55287 AL589674.2-201ENST00000604304 337 ntBASIC5□□□□□ -1.61
CDH11P55287 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 AL356608.1-201ENST00000610034 820 ntBASIC5□□□□□ -1.61
CDH11P55287 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5□□□□□ -1.61
CDH11P55287 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5□□□□□ -1.61
CDH11P55287 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5□□□□□ -1.61
CDH11P55287 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CDH11P55287 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5□□□□□ -1.61
CDH11P55287 AP005432.1-201ENST00000580891 3485 ntBASIC5□□□□□ -1.61
CDH11P55287 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
CDH11P55287 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH11P55287 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5□□□□□ -1.61
CDH11P55287 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CDH11P55287 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5□□□□□ -1.61
CDH11P55287 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms