Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HMGCS2P54868 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGCS2P54868 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGCS2P54868 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HMGCS2P54868 RN7SKP185-201ENST00000362813 326 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGCS2P54868 AL021331.1-201ENST00000402817 582 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGCS2P54868 AC007559.1-201ENST00000428736 355 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGCS2P54868 AC091390.1-201ENST00000433904 331 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 AC090018.1-201ENST00000434369 367 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 AC093414.1-201ENST00000434712 514 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 H3F3BP1-201ENST00000440551 403 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 RPL36AP15-201ENST00000444514 266 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 NDUFA5P9-201ENST00000472609 340 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 RN7SL814P-201ENST00000487715 300 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 RPS24P16-201ENST00000497294 392 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGCS2P54868 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.88□□□□□ -1.47
HMGCS2P54868 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGCS2P54868 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGCS2P54868 AL391358.1-201ENST00000605342 190 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 AP001521.2-201ENST00000608772 546 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGCS2P54868 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGCS2P54868 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
HMGCS2P54868 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGCS2P54868 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HMGCS2P54868 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGCS2P54868 AC018628.1-201ENST00000624147 3819 ntBASIC5.88□□□□□ -1.47
HMGCS2P54868 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGCS2P54868 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.87□□□□□ -1.47
HMGCS2P54868 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 AC126755.2-208ENST00000327792 462 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 AC138969.1-213ENST00000331436 462 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 GLULP6-201ENST00000399502 913 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 HMGB3P7-201ENST00000400214 611 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 AC092570.3-201ENST00000420113 693 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 C4BPAP2-201ENST00000428434 478 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 AC016712.1-201ENST00000431088 378 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.87□□□□□ -1.47
HMGCS2P54868 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.87□□□□□ -1.47
HMGCS2P54868 RBMY2TP-201ENST00000451162 947 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGCS2P54868 AL356390.1-201ENST00000455684 397 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 snoU13.29-201ENST00000459370 104 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 AC092905.1-201ENST00000467527 949 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 RPL5P12-201ENST00000477071 851 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGCS2P54868 AC093720.1-201ENST00000505681 714 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 AC093524.1-201ENST00000564266 1094 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 EIF1P5-201ENST00000585002 234 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.87□□□□□ -1.47
HMGCS2P54868 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGCS2P54868 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HMGCS2P54868 AC006210.2-201ENST00000367074 1545 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 AC099654.3-201ENST00000447087 1546 ntBASIC5.87□□□□□ -1.47
HMGCS2P54868 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HMGCS2P54868 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.87□□□□□ -1.47
HMGCS2P54868 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HMGCS2P54868 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCS2P54868 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGCS2P54868 AC099654.2-201ENST00000433031 1980 ntBASIC5.86□□□□□ -1.47
HMGCS2P54868 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCS2P54868 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HMGCS2P54868 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCS2P54868 DNAJC19P7-201ENST00000428811 344 ntBASIC5.86□□□□□ -1.47
HMGCS2P54868 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGCS2P54868 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGCS2P54868 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGCS2P54868 AC006967.1-201ENST00000467608 589 ntBASIC5.86□□□□□ -1.47
HMGCS2P54868 RPS12P31-201ENST00000491419 398 ntBASIC5.86□□□□□ -1.47
HMGCS2P54868 C1GALT1P3-201ENST00000522049 819 ntBASIC5.86□□□□□ -1.47
HMGCS2P54868 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.86□□□□□ -1.47
HMGCS2P54868 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGCS2P54868 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGCS2P54868 AC005377.1-201ENST00000605126 456 ntBASIC5.86□□□□□ -1.47
HMGCS2P54868 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGCS2P54868 AC005618.4-201ENST00000625053 554 ntBASIC5.86□□□□□ -1.47
HMGCS2P54868 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.86□□□□□ -1.47
HMGCS2P54868 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCS2P54868 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGCS2P54868 AL137058.3-201ENST00000624531 3099 ntBASIC5.86□□□□□ -1.47
HMGCS2P54868 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HMGCS2P54868 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGCS2P54868 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms