Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC087283.1-201ENST00000604029 1074 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AC069431.2-201ENST00000604149 1099 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXA1P49639 AC092681.3-201ENST00000609463 678 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXA1P49639 AC004801.6-201ENST00000616571 978 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 AC211486.4-201ENST00000621495 113 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.72□□□□□ -1.65
HOXA1P49639 AP004607.3-201ENST00000530354 3915 ntBASIC4.72□□□□□ -1.65
HOXA1P49639 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
HOXA1P49639 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA1P49639 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA1P49639 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA1P49639 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA1P49639 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXA1P49639 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.72□□□□□ -1.65
HOXA1P49639 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HOXA1P49639 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
HOXA1P49639 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HOXA1P49639 AC011933.2-201ENST00000578539 2790 ntBASIC4.71□□□□□ -1.65
HOXA1P49639 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA1P49639 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC005332.5-201ENST00000591222 2919 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA1P49639 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA1P49639 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA1P49639 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA1P49639 RBMY1HP-201ENST00000382759 1389 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA1P49639 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA1P49639 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA1P49639 SNORA21-201ENST00000362423 132 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 RNU1-134P-201ENST00000362935 165 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AL672167.2-201ENST00000377164 879 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 RNU6-31P-201ENST00000384388 108 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 RNU6-1257P-201ENST00000384625 110 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 TAF9BP2-201ENST00000400856 499 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA1P49639 RMRPP5-201ENST00000411156 267 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA1P49639 TCEA1P2-201ENST00000420496 906 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AC006065.1-201ENST00000422539 802 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA1P49639 PRUNEP1-201ENST00000425846 705 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC242426.1-201ENST00000435270 960 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA1P49639 CLNS1AP1-201ENST00000435954 682 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AC096775.1-201ENST00000437724 448 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 PA2G4P1-201ENST00000442248 1197 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 GTF3AP5-201ENST00000442645 697 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 RPS7P3-201ENST00000443360 580 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA1P49639 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC007383.1-201ENST00000445875 636 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA1P49639 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC069277.2-201ENST00000454211 432 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC021660.1-201ENST00000465006 554 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 CYCSP20-201ENST00000473154 315 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AC006539.1-201ENST00000481419 501 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 HMGB1P38-201ENST00000490557 577 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA1P49639 SNRPCP11-201ENST00000492453 205 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 SUMO2P5-201ENST00000506790 245 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AC069306.1-201ENST00000507006 843 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA1P49639 CR383658.1-201ENST00000514609 734 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA1P49639 SNORA74.1-201ENST00000516320 180 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA1P49639 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA1P49639 AL512310.9-201ENST00000553311 948 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AL358913.1-201ENST00000554342 121 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.71□□□□□ -1.66
HOXA1P49639 HMGN1P26-201ENST00000558737 303 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA1P49639 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.71□□□□□ -1.66
HOXA1P49639 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC012368.3-201ENST00000604190 219 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AC078880.5-201ENST00000617845 421 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AC105105.5-201ENST00000622635 1294 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AC015660.5-201ENST00000623238 564 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC4.71□□□□□ -1.66
HOXA1P49639 AC126544.2-201ENST00000625174 749 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 AC013437.2-201ENST00000639587 677 ntBASIC4.71□□□□□ -1.66
HOXA1P49639 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA1P49639 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HOXA1P49639 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HOXA1P49639 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HOXA1P49639 HSPD1P9-201ENST00000420325 1636 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms