Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HADHAP40939 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HADHAP40939 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HADHAP40939 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.63□□□□□ -1.51
HADHAP40939 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.63□□□□□ -1.51
HADHAP40939 LINC01963-201ENST00000562038 3148 ntBASIC5.63□□□□□ -1.51
HADHAP40939 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HADHAP40939 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HADHAP40939 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.63□□□□□ -1.51
HADHAP40939 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
HADHAP40939 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HADHAP40939 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HADHAP40939 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
HADHAP40939 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.62□□□□□ -1.51
HADHAP40939 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HADHAP40939 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HADHAP40939 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HADHAP40939 RNA5SP131-201ENST00000365452 119 ntBASIC5.62□□□□□ -1.51
HADHAP40939 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.62□□□□□ -1.51
HADHAP40939 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.62□□□□□ -1.51
HADHAP40939 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HADHAP40939 AL009179.1-201ENST00000406085 265 ntBASIC5.62□□□□□ -1.51
HADHAP40939 GAPDHP42-201ENST00000406848 981 ntBASIC5.62□□□□□ -1.51
HADHAP40939 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.62□□□□□ -1.51
HADHAP40939 AC006065.1-201ENST00000422539 802 ntBASIC5.62□□□□□ -1.51
HADHAP40939 OR6K4P-201ENST00000423179 955 ntBASIC5.62□□□□□ -1.51
HADHAP40939 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.62□□□□□ -1.51
HADHAP40939 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.62□□□□□ -1.51
HADHAP40939 NDUFB4P8-201ENST00000435351 367 ntBASIC5.62□□□□□ -1.51
HADHAP40939 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.62□□□□□ -1.51
HADHAP40939 MTCYBP12-201ENST00000440559 1134 ntBASIC5.62□□□□□ -1.51
HADHAP40939 AC073465.2-201ENST00000440938 498 ntBASIC5.62□□□□□ -1.51
HADHAP40939 AL353898.1-201ENST00000444055 238 ntBASIC5.62□□□□□ -1.51
HADHAP40939 AC005297.1-201ENST00000444765 862 ntBASIC5.62□□□□□ -1.51
HADHAP40939 SUMO2P1-206ENST00000445436 284 ntBASIC5.62□□□□□ -1.51
HADHAP40939 AL450996.1-201ENST00000445574 1202 ntBASIC5.62□□□□□ -1.51
HADHAP40939 HMGN1P36-201ENST00000446623 298 ntBASIC5.62□□□□□ -1.51
HADHAP40939 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.62□□□□□ -1.51
HADHAP40939 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HADHAP40939 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HADHAP40939 RPL37AP8-201ENST00000494116 276 ntBASIC5.62□□□□□ -1.51
HADHAP40939 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HADHAP40939 BTG4P1-201ENST00000510421 183 ntBASIC5.62□□□□□ -1.51
HADHAP40939 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.62□□□□□ -1.51
HADHAP40939 IGLV3-24-201ENST00000517477 197 ntBASIC5.62□□□□□ -1.51
HADHAP40939 OR5AM1P-201ENST00000532136 1032 ntBASIC5.62□□□□□ -1.51
HADHAP40939 HSPE1P2-201ENST00000554777 306 ntBASIC5.62□□□□□ -1.51
HADHAP40939 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.62□□□□□ -1.51
HADHAP40939 MTCO3P22-201ENST00000603219 784 ntBASIC5.62□□□□□ -1.51
HADHAP40939 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.62□□□□□ -1.51
HADHAP40939 AP000894.4-201ENST00000610185 483 ntBASIC5.62□□□□□ -1.51
HADHAP40939 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
HADHAP40939 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HADHAP40939 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HADHAP40939 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.62□□□□□ -1.51
HADHAP40939 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
HADHAP40939 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HADHAP40939 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HADHAP40939 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HADHAP40939 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.62□□□□□ -1.51
HADHAP40939 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HADHAP40939 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
HADHAP40939 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HADHAP40939 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HADHAP40939 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HADHAP40939 AC068870.1-201ENST00000563737 2455 ntBASIC5.62□□□□□ -1.51
HADHAP40939 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HADHAP40939 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HADHAP40939 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HADHAP40939 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HADHAP40939 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HADHAP40939 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.61□□□□□ -1.51
HADHAP40939 MIR143-201ENST00000385300 106 ntBASIC5.61□□□□□ -1.51
HADHAP40939 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HADHAP40939 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.61□□□□□ -1.51
HADHAP40939 AC093155.2-201ENST00000420734 937 ntBASIC5.61□□□□□ -1.51
HADHAP40939 BX119321.1-201ENST00000428912 797 ntBASIC5.61□□□□□ -1.51
HADHAP40939 AC006335.2-201ENST00000437993 330 ntBASIC5.61□□□□□ -1.51
HADHAP40939 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.61□□□□□ -1.51
HADHAP40939 XKRY2-201ENST00000442362 1093 ntBASIC5.61□□□□□ -1.51
HADHAP40939 AC007000.2-201ENST00000442564 487 ntBASIC5.61□□□□□ -1.51
HADHAP40939 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.61□□□□□ -1.51
HADHAP40939 NPM1P39-201ENST00000449818 867 ntBASIC5.61□□□□□ -1.51
HADHAP40939 MRE11P1-201ENST00000464884 2127 ntBASIC5.61□□□□□ -1.51
HADHAP40939 AP000797.2-201ENST00000475768 606 ntBASIC5.61□□□□□ -1.51
HADHAP40939 SUMO1P1-201ENST00000497904 306 ntBASIC5.61□□□□□ -1.51
HADHAP40939 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.61□□□□□ -1.51
HADHAP40939 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.61□□□□□ -1.51
HADHAP40939 RNU6-467P-201ENST00000517027 110 ntBASIC5.61□□□□□ -1.51
HADHAP40939 SNORA43.3-201ENST00000517240 103 ntBASIC5.61□□□□□ -1.51
HADHAP40939 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.61□□□□□ -1.51
HADHAP40939 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.61□□□□□ -1.51
HADHAP40939 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.61□□□□□ -1.51
HADHAP40939 AC079064.1-201ENST00000528365 362 ntBASIC5.61□□□□□ -1.51
HADHAP40939 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.61□□□□□ -1.51
HADHAP40939 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.61□□□□□ -1.51
HADHAP40939 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.61□□□□□ -1.51
HADHAP40939 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.61□□□□□ -1.51
HADHAP40939 HSPA8P14-201ENST00000552265 1805 ntBASIC5.61□□□□□ -1.51
HADHAP40939 CKS1BP1-201ENST00000555221 240 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms