Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CTNNA1P35221 AC107027.3-201ENST00000565095 3473 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 OR9G4-201ENST00000302957 984 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CTNNA1P35221 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CTNNA1P35221 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CTNNA1P35221 AC211486.3-201ENST00000412694 621 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 RPA2P2-201ENST00000419698 796 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.65□□□□□ -1.5
CTNNA1P35221 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.65□□□□□ -1.5
CTNNA1P35221 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CTNNA1P35221 AL606490.8-201ENST00000441624 319 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 FHP1-201ENST00000442741 703 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CTNNA1P35221 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CTNNA1P35221 AC092754.1-201ENST00000472975 479 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 AC069304.1-201ENST00000491593 704 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.65□□□□□ -1.5
CTNNA1P35221 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.65□□□□□ -1.5
CTNNA1P35221 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CTNNA1P35221 MTCYBP19-201ENST00000517463 1124 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 TMEM97P2-201ENST00000517841 403 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 NRBF2P4-201ENST00000520874 850 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.65□□□□□ -1.5
CTNNA1P35221 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.65□□□□□ -1.5
CTNNA1P35221 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.65□□□□□ -1.5
CTNNA1P35221 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.65□□□□□ -1.5
CTNNA1P35221 MIR6780B-201ENST00000610307 79 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 MIR6839-201ENST00000620425 113 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 MIR193BHG-214ENST00000641765 509 ntBASIC5.65□□□□□ -1.5
CTNNA1P35221 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CTNNA1P35221 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.65□□□□□ -1.51
CTNNA1P35221 MRRFP1-201ENST00000435941 1675 ntBASIC5.65□□□□□ -1.51
CTNNA1P35221 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CTNNA1P35221 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CTNNA1P35221 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CTNNA1P35221 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CTNNA1P35221 AL450345.1-202ENST00000605741 3881 ntBASIC5.65□□□□□ -1.51
CTNNA1P35221 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CTNNA1P35221 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.65□□□□□ -1.51
CTNNA1P35221 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CTNNA1P35221 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.65□□□□□ -1.51
CTNNA1P35221 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTNNA1P35221 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTNNA1P35221 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTNNA1P35221 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTNNA1P35221 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CTNNA1P35221 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.64□□□□□ -1.51
CTNNA1P35221 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CTNNA1P35221 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTNNA1P35221 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTNNA1P35221 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTNNA1P35221 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.64□□□□□ -1.51
CTNNA1P35221 RNU1-19P-201ENST00000363306 165 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTNNA1P35221 RPL12P9-201ENST00000412942 488 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.64□□□□□ -1.51
CTNNA1P35221 AC009302.1-201ENST00000417147 390 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.64□□□□□ -1.51
CTNNA1P35221 BX119321.1-201ENST00000428912 797 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.64□□□□□ -1.51
CTNNA1P35221 AC090018.1-201ENST00000434369 367 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 DNAJA1P5-201ENST00000440278 943 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 AC019185.1-201ENST00000442718 389 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.64□□□□□ -1.51
CTNNA1P35221 AL672138.1-201ENST00000450604 1015 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
CTNNA1P35221 RN7SL809P-201ENST00000482040 297 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.64□□□□□ -1.51
CTNNA1P35221 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.64□□□□□ -1.51
CTNNA1P35221 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.64□□□□□ -1.51
CTNNA1P35221 AC034244.2-201ENST00000514668 858 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.64□□□□□ -1.51
CTNNA1P35221 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.64□□□□□ -1.51
CTNNA1P35221 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.64□□□□□ -1.51
CTNNA1P35221 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.64□□□□□ -1.51
CTNNA1P35221 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.64□□□□□ -1.51
CTNNA1P35221 AC114947.2-201ENST00000565748 2125 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.64□□□□□ -1.51
CTNNA1P35221 AC068020.1-201ENST00000594215 661 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 AC006272.2-201ENST00000594725 163 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.64□□□□□ -1.51
CTNNA1P35221 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.64□□□□□ -1.51
CTNNA1P35221 AC130352.1-201ENST00000602979 661 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 AC005021.1-201ENST00000608730 355 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.64□□□□□ -1.51
CTNNA1P35221 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.64□□□□□ -1.51
CTNNA1P35221 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTNNA1P35221 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CTNNA1P35221 KARSP1-201ENST00000451871 1752 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTNNA1P35221 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CTNNA1P35221 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CTNNA1P35221 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CTNNA1P35221 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.64□□□□□ -1.51
CTNNA1P35221 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CTNNA1P35221 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CTNNA1P35221 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms