Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC117525.1-201ENST00000515228 503 ntBASIC5.78□□□□□ -1.48
HOXC8P31273 RNU6-362P-201ENST00000516736 90 ntBASIC5.78□□□□□ -1.48
HOXC8P31273 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXC8P31273 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC8P31273 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC8P31273 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXC8P31273 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC8P31273 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXC8P31273 AL159169.2-201ENST00000610061 1269 ntBASIC5.78□□□□□ -1.48
HOXC8P31273 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC8P31273 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
HOXC8P31273 AC015799.1-201ENST00000622996 3122 ntBASIC5.78□□□□□ -1.48
HOXC8P31273 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
HOXC8P31273 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXC8P31273 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC8P31273 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXC8P31273 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
HOXC8P31273 AP000432.2-201ENST00000624164 2048 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC8P31273 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
HOXC8P31273 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC8P31273 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC8P31273 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
HOXC8P31273 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
HOXC8P31273 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXC8P31273 RN7SKP95-201ENST00000362860 303 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC8P31273 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HOXC8P31273 GJA6P-201ENST00000415117 1042 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 NIPA2P1-201ENST00000426223 976 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 AC009784.1-201ENST00000426484 460 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXC8P31273 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.77□□□□□ -1.49
HOXC8P31273 XKRYP6-201ENST00000440468 1116 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 XKRYP3-201ENST00000442113 1116 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 AC073648.4-201ENST00000442655 781 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 RAB28P3-201ENST00000448325 597 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXC8P31273 AC083982.1-201ENST00000485679 344 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXC8P31273 AC092593.2-201ENST00000513866 913 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 AC006427.1-201ENST00000514359 712 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC8P31273 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC8P31273 AC009027.1-201ENST00000604510 479 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 LSM1P2-201ENST00000604911 322 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 AP005432.2-201ENST00000608162 586 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HOXC8P31273 AC003985.2-201ENST00000562268 1669 ntBASIC5.77□□□□□ -1.49
HOXC8P31273 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXC8P31273 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
HOXC8P31273 AC004656.1-201ENST00000568479 4951 ntBASIC5.76□□□□□ -1.49
HOXC8P31273 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC8P31273 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC8P31273 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC8P31273 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC8P31273 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC8P31273 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC8P31273 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC8P31273 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC8P31273 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC8P31273 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC8P31273 RPL34P20-201ENST00000442771 351 ntBASIC5.76□□□□□ -1.49
HOXC8P31273 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC8P31273 AC093827.1-201ENST00000480094 861 ntBASIC5.76□□□□□ -1.49
HOXC8P31273 HMGN2P25-201ENST00000486956 268 ntBASIC5.76□□□□□ -1.49
HOXC8P31273 AC007686.1-201ENST00000488511 463 ntBASIC5.76□□□□□ -1.49
HOXC8P31273 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
HOXC8P31273 RN7SKP67-201ENST00000515905 235 ntBASIC5.76□□□□□ -1.49
HOXC8P31273 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC8P31273 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC8P31273 AC079064.1-201ENST00000528365 362 ntBASIC5.76□□□□□ -1.49
HOXC8P31273 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC8P31273 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC8P31273 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC8P31273 AC009268.1-201ENST00000561352 1203 ntBASIC5.76□□□□□ -1.49
HOXC8P31273 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXC8P31273 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC8P31273 AC006213.4-201ENST00000616184 634 ntBASIC5.76□□□□□ -1.49
HOXC8P31273 AL031658.2-201ENST00000616850 651 ntBASIC5.76□□□□□ -1.49
HOXC8P31273 AC006213.5-201ENST00000619673 288 ntBASIC5.76□□□□□ -1.49
HOXC8P31273 AC099654.6-201ENST00000636487 512 ntBASIC5.76□□□□□ -1.49
HOXC8P31273 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC8P31273 AC007996.1-201ENST00000620414 2821 ntBASIC5.76□□□□□ -1.49
HOXC8P31273 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXC8P31273 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC8P31273 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC8P31273 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXC8P31273 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
HOXC8P31273 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HOXC8P31273 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXC8P31273 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HOXC8P31273 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
HOXC8P31273 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC8P31273 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC8P31273 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
HOXC8P31273 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC8P31273 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC8P31273 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms