Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL034374.1-201ENST00000406329 351 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.74□□□□□ -1.33
CNGA1P29973 AC093422.3-201ENST00000428506 305 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 CFL1P1-202ENST00000432948 411 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 YWHAZP2-201ENST00000440317 728 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.74□□□□□ -1.33
CNGA1P29973 AC021205.1-201ENST00000468797 348 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CNGA1P29973 PFN1P6-201ENST00000476786 399 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 RN7SL184P-201ENST00000488308 297 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.74□□□□□ -1.33
CNGA1P29973 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.74□□□□□ -1.33
CNGA1P29973 AC091163.3-201ENST00000518269 1144 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CNGA1P29973 HMGN2P36-201ENST00000529541 409 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.74□□□□□ -1.33
CNGA1P29973 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.74□□□□□ -1.33
CNGA1P29973 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.74□□□□□ -1.33
CNGA1P29973 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.74□□□□□ -1.33
CNGA1P29973 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.74□□□□□ -1.33
CNGA1P29973 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.74□□□□□ -1.33
CNGA1P29973 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.74□□□□□ -1.33
CNGA1P29973 AC112220.2-201ENST00000605513 533 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 RN7SL544P-201ENST00000617232 284 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 AC022079.2-201ENST00000619739 566 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 RN7SL763P-201ENST00000620922 284 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.74□□□□□ -1.33
CNGA1P29973 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.74□□□□□ -1.33
CNGA1P29973 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CNGA1P29973 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
CNGA1P29973 MTCO1P18-201ENST00000455518 1419 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CNGA1P29973 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
CNGA1P29973 AC109780.1-201ENST00000451768 1344 ntBASIC6.74□□□□□ -1.33
CNGA1P29973 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.74□□□□□ -1.33
CNGA1P29973 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
CNGA1P29973 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.74□□□□□ -1.33
CNGA1P29973 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CNGA1P29973 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.73□□□□□ -1.33
CNGA1P29973 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNGA1P29973 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNGA1P29973 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CNGA1P29973 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNGA1P29973 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNGA1P29973 RN7SKP124-201ENST00000364730 341 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNGA1P29973 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.73□□□□□ -1.33
CNGA1P29973 ANAPC10P1-201ENST00000395991 556 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.73□□□□□ -1.33
CNGA1P29973 MRPL53P1-201ENST00000414323 319 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 OR6E1P-201ENST00000414424 923 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 MTCO3P4-201ENST00000419236 787 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 NMD3P2-201ENST00000421815 761 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.73□□□□□ -1.33
CNGA1P29973 FO393419.3-201ENST00000428741 282 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.73□□□□□ -1.33
CNGA1P29973 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.73□□□□□ -1.33
CNGA1P29973 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.73□□□□□ -1.33
CNGA1P29973 GAPDHP58-201ENST00000438477 1006 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 PTMAP6-201ENST00000439110 327 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 MTCO1P53-201ENST00000441633 699 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 SPRYD7P1-201ENST00000443861 570 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 RPL7P61-201ENST00000451721 751 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 GTF2IP12-201ENST00000456547 356 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 AC107015.1-201ENST00000466902 747 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 CR383656.1-201ENST00000484916 377 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CNGA1P29973 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.73□□□□□ -1.33
CNGA1P29973 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.73□□□□□ -1.33
CNGA1P29973 NPM1P35-201ENST00000533043 868 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.73□□□□□ -1.33
CNGA1P29973 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.73□□□□□ -1.33
CNGA1P29973 AL049872.1-201ENST00000556323 322 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.73□□□□□ -1.33
CNGA1P29973 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.73□□□□□ -1.33
CNGA1P29973 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.73□□□□□ -1.33
CNGA1P29973 AGGF1P5-201ENST00000567900 919 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 MIR4789-201ENST00000577469 82 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.73□□□□□ -1.33
CNGA1P29973 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
CNGA1P29973 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.73□□□□□ -1.33
CNGA1P29973 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.73□□□□□ -1.33
CNGA1P29973 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CNGA1P29973 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNGA1P29973 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNGA1P29973 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNGA1P29973 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CNGA1P29973 ZNF849P-201ENST00000594711 1566 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 PROS2P-201ENST00000474651 1951 ntBASIC6.73□□□□□ -1.33
CNGA1P29973 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.73□□□□□ -1.33
CNGA1P29973 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
CNGA1P29973 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.72□□□□□ -1.33
CNGA1P29973 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
CNGA1P29973 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CNGA1P29973 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms