Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RN7SL802P-201ENST00000577858 299 ntBASIC5.92□□□□□ -1.46
COL4A5P29400 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A5P29400 AL161637.1-201ENST00000622380 412 ntBASIC5.92□□□□□ -1.46
COL4A5P29400 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A5P29400 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.92□□□□□ -1.46
COL4A5P29400 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A5P29400 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.92□□□□□ -1.46
COL4A5P29400 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
COL4A5P29400 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A5P29400 AC068446.1-201ENST00000556425 1549 ntBASIC5.92□□□□□ -1.46
COL4A5P29400 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
COL4A5P29400 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL4A5P29400 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL4A5P29400 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
COL4A5P29400 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.91□□□□□ -1.46
COL4A5P29400 LRRC37BP1-201ENST00000398851 714 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.91□□□□□ -1.46
COL4A5P29400 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 AC104971.1-201ENST00000495117 578 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 RNA5SP464-201ENST00000516251 108 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 AC133555.2-201ENST00000550213 292 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 MIR6716-201ENST00000613413 80 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 MIR6133-201ENST00000617057 108 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 AC019206.1-201ENST00000621938 425 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A5P29400 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A5P29400 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A5P29400 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.91□□□□□ -1.46
COL4A5P29400 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A5P29400 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A5P29400 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A5P29400 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A5P29400 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A5P29400 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.91□□□□□ -1.46
COL4A5P29400 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL4A5P29400 RNA5SP223-201ENST00000365174 120 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.91□□□□□ -1.46
COL4A5P29400 AL450023.3-201ENST00000440592 271 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.91□□□□□ -1.46
COL4A5P29400 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.91□□□□□ -1.46
COL4A5P29400 AC108751.3-201ENST00000461814 1020 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 AC010618.1-201ENST00000469924 477 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
COL4A5P29400 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.91□□□□□ -1.46
COL4A5P29400 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.91□□□□□ -1.46
COL4A5P29400 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.91□□□□□ -1.46
COL4A5P29400 MIR3939-201ENST00000582614 106 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 AC010424.2-201ENST00000607594 443 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 AC108359.1-201ENST00000616451 1211 ntBASIC5.91□□□□□ -1.46
COL4A5P29400 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
COL4A5P29400 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A5P29400 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL4A5P29400 OR56B2P-202ENST00000641377 2453 ntBASIC5.9□□□□□ -1.46
COL4A5P29400 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.9□□□□□ -1.46
COL4A5P29400 RNA5SP388-201ENST00000362584 119 ntBASIC5.9□□□□□ -1.47
COL4A5P29400 RN7SKP227-201ENST00000364445 330 ntBASIC5.9□□□□□ -1.47
COL4A5P29400 ST13P16-201ENST00000401760 781 ntBASIC5.9□□□□□ -1.47
COL4A5P29400 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.9□□□□□ -1.47
COL4A5P29400 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.9□□□□□ -1.47
COL4A5P29400 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.9□□□□□ -1.47
COL4A5P29400 AC009238.2-201ENST00000431026 355 ntBASIC5.9□□□□□ -1.47
COL4A5P29400 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.9□□□□□ -1.47
COL4A5P29400 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.9□□□□□ -1.47
COL4A5P29400 RPS5P7-201ENST00000456664 608 ntBASIC5.9□□□□□ -1.47
COL4A5P29400 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.9□□□□□ -1.47
COL4A5P29400 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.9□□□□□ -1.47
COL4A5P29400 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.9□□□□□ -1.47
COL4A5P29400 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.9□□□□□ -1.47
COL4A5P29400 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.47
COL4A5P29400 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.9□□□□□ -1.47
COL4A5P29400 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.9□□□□□ -1.47
COL4A5P29400 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.9□□□□□ -1.47
COL4A5P29400 AC022726.1-201ENST00000587475 207 ntBASIC5.9□□□□□ -1.47
COL4A5P29400 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.9□□□□□ -1.47
COL4A5P29400 AC115286.1-201ENST00000604298 434 ntBASIC5.9□□□□□ -1.47
COL4A5P29400 AL596275.2-208ENST00000641192 594 ntBASIC5.9□□□□□ -1.47
COL4A5P29400 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
COL4A5P29400 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL4A5P29400 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL4A5P29400 AL442639.1-201ENST00000625030 1899 ntBASIC5.9□□□□□ -1.47
COL4A5P29400 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
COL4A5P29400 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
COL4A5P29400 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
COL4A5P29400 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.89□□□□□ -1.47
COL4A5P29400 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms