Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTGFP29279 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
CTGFP29279 AL021877.2-201ENST00000624442 10684 ntBASIC6.08□□□□□ -1.44
CTGFP29279 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTGFP29279 AL034549.2-201ENST00000618285 3373 ntBASIC6.08□□□□□ -1.44
CTGFP29279 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTGFP29279 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTGFP29279 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.08□□□□□ -1.44
CTGFP29279 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CTGFP29279 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.08□□□□□ -1.44
CTGFP29279 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CTGFP29279 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.08□□□□□ -1.44
CTGFP29279 AC007114.2-201ENST00000576014 4281 ntBASIC6.08□□□□□ -1.44
CTGFP29279 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 CASC19-255ENST00000641733 1385 ntBASIC6.07□□□□□ -1.44
CTGFP29279 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.07□□□□□ -1.44
CTGFP29279 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.07□□□□□ -1.44
CTGFP29279 AC022164.1-201ENST00000568767 2673 ntBASIC6.07□□□□□ -1.44
CTGFP29279 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 U3.3-201ENST00000362986 216 ntBASIC6.07□□□□□ -1.44
CTGFP29279 MIR105-1-201ENST00000385222 81 ntBASIC6.07□□□□□ -1.44
CTGFP29279 AP003170.5-201ENST00000397185 335 ntBASIC6.07□□□□□ -1.44
CTGFP29279 NPM1P40-201ENST00000412758 733 ntBASIC6.07□□□□□ -1.44
CTGFP29279 ARAFP1-201ENST00000422172 605 ntBASIC6.07□□□□□ -1.44
CTGFP29279 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.07□□□□□ -1.44
CTGFP29279 RNF19BPX-201ENST00000426224 625 ntBASIC6.07□□□□□ -1.44
CTGFP29279 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.07□□□□□ -1.44
CTGFP29279 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.07□□□□□ -1.44
CTGFP29279 AL513321.1-201ENST00000441175 761 ntBASIC6.07□□□□□ -1.44
CTGFP29279 RPL34P20-201ENST00000442771 351 ntBASIC6.07□□□□□ -1.44
CTGFP29279 RPL36AP15-201ENST00000444514 266 ntBASIC6.07□□□□□ -1.44
CTGFP29279 AC012512.1-201ENST00000446594 718 ntBASIC6.07□□□□□ -1.44
CTGFP29279 AL161722.1-201ENST00000446972 1032 ntBASIC6.07□□□□□ -1.44
CTGFP29279 AL513533.1-201ENST00000453728 415 ntBASIC6.07□□□□□ -1.44
CTGFP29279 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.07□□□□□ -1.44
CTGFP29279 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 AC093663.2-201ENST00000484625 313 ntBASIC6.07□□□□□ -1.44
CTGFP29279 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.07□□□□□ -1.44
CTGFP29279 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.07□□□□□ -1.44
CTGFP29279 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.07□□□□□ -1.44
CTGFP29279 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.07□□□□□ -1.44
CTGFP29279 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.07□□□□□ -1.44
CTGFP29279 AP006289.1-201ENST00000538089 277 ntBASIC6.07□□□□□ -1.44
CTGFP29279 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC6.07□□□□□ -1.44
CTGFP29279 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC6.07□□□□□ -1.44
CTGFP29279 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.07□□□□□ -1.44
CTGFP29279 H3F3BP2-201ENST00000583907 357 ntBASIC6.07□□□□□ -1.44
CTGFP29279 ZNF92P3-201ENST00000596594 954 ntBASIC6.07□□□□□ -1.44
CTGFP29279 AL133247.2-201ENST00000603236 482 ntBASIC6.07□□□□□ -1.44
CTGFP29279 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.07□□□□□ -1.44
CTGFP29279 AC006386.1-201ENST00000619436 415 ntBASIC6.07□□□□□ -1.44
CTGFP29279 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.07□□□□□ -1.44
CTGFP29279 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.07□□□□□ -1.44
CTGFP29279 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CTGFP29279 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.07□□□□□ -1.44
CTGFP29279 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CTGFP29279 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.07□□□□□ -1.44
CTGFP29279 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
CTGFP29279 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTGFP29279 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
CTGFP29279 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.06□□□□□ -1.44
CTGFP29279 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTGFP29279 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CTGFP29279 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.06□□□□□ -1.44
CTGFP29279 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTGFP29279 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.06□□□□□ -1.44
CTGFP29279 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTGFP29279 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTGFP29279 RNU6-1257P-201ENST00000384625 110 ntBASIC6.06□□□□□ -1.44
CTGFP29279 MIR600-201ENST00000385007 98 ntBASIC6.06□□□□□ -1.44
CTGFP29279 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.06□□□□□ -1.44
CTGFP29279 RPS4XP9-201ENST00000405151 780 ntBASIC6.06□□□□□ -1.44
CTGFP29279 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.06□□□□□ -1.44
CTGFP29279 RPS3AP25-201ENST00000411660 793 ntBASIC6.06□□□□□ -1.44
CTGFP29279 HSFY4P-201ENST00000415994 1181 ntBASIC6.06□□□□□ -1.44
CTGFP29279 RNF10P1-201ENST00000418589 369 ntBASIC6.06□□□□□ -1.44
CTGFP29279 AC092570.3-201ENST00000420113 693 ntBASIC6.06□□□□□ -1.44
CTGFP29279 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.06□□□□□ -1.44
CTGFP29279 ZNF965P-201ENST00000432501 817 ntBASIC6.06□□□□□ -1.44
CTGFP29279 TMEM183AP1-205ENST00000432739 290 ntBASIC6.06□□□□□ -1.44
CTGFP29279 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.06□□□□□ -1.44
CTGFP29279 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.06□□□□□ -1.44
CTGFP29279 MOB1AP2-201ENST00000446060 614 ntBASIC6.06□□□□□ -1.44
CTGFP29279 TPT1P12-201ENST00000448968 492 ntBASIC6.06□□□□□ -1.44
CTGFP29279 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms