Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RPL7P45-201ENST00000455851 743 ntBASIC5.43□□□□□ -1.54
PTPN3P26045 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN3P26045 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN3P26045 RPSAP39-201ENST00000467439 883 ntBASIC5.43□□□□□ -1.54
PTPN3P26045 RPL7P41-201ENST00000485823 957 ntBASIC5.43□□□□□ -1.54
PTPN3P26045 RPEP1-201ENST00000504507 658 ntBASIC5.43□□□□□ -1.54
PTPN3P26045 AC022360.1-201ENST00000521058 340 ntBASIC5.43□□□□□ -1.54
PTPN3P26045 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN3P26045 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN3P26045 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN3P26045 AP003168.1-201ENST00000530091 307 ntBASIC5.43□□□□□ -1.54
PTPN3P26045 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN3P26045 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN3P26045 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN3P26045 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN3P26045 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN3P26045 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.43□□□□□ -1.54
PTPN3P26045 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN3P26045 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.43□□□□□ -1.54
PTPN3P26045 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.43□□□□□ -1.54
PTPN3P26045 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN3P26045 AC004477.3-201ENST00000614061 590 ntBASIC5.43□□□□□ -1.54
PTPN3P26045 AC003001.2-201ENST00000616294 831 ntBASIC5.43□□□□□ -1.54
PTPN3P26045 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN3P26045 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN3P26045 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.43□□□□□ -1.54
PTPN3P26045 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN3P26045 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN3P26045 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN3P26045 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
PTPN3P26045 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PTPN3P26045 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN3P26045 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN3P26045 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
PTPN3P26045 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PTPN3P26045 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN3P26045 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN3P26045 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN3P26045 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN3P26045 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN3P26045 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN3P26045 U3.23-201ENST00000391132 200 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN3P26045 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.42□□□□□ -1.54
PTPN3P26045 AC090018.1-201ENST00000434369 367 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN3P26045 CYCSP12-201ENST00000437729 300 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.42□□□□□ -1.54
PTPN3P26045 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN3P26045 AL157884.3-201ENST00000448273 1184 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 HSPE1P22-201ENST00000456856 327 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 RN7SL814P-201ENST00000487715 300 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 RN7SL184P-201ENST00000488308 297 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN3P26045 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN3P26045 RNA5SP373-201ENST00000517271 95 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 IGLVIV-64-201ENST00000518581 301 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN3P26045 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN3P26045 HMGB1P40-201ENST00000525121 540 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 OR4V1P-201ENST00000525394 1140 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 AC109635.6-201ENST00000525487 1113 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN3P26045 EIF4A2P5-201ENST00000529914 499 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PTPN3P26045 AC027369.5-201ENST00000533838 755 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PTPN3P26045 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN3P26045 MTCYBP13-201ENST00000578634 1093 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN3P26045 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN3P26045 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.42□□□□□ -1.54
PTPN3P26045 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PTPN3P26045 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN3P26045 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.42□□□□□ -1.54
PTPN3P26045 AC005520.3-201ENST00000602874 370 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 AC005252.1-201ENST00000604518 1063 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 AL162431.4-201ENST00000604674 411 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 HMGB1P51-201ENST00000605166 638 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 AC015802.5-201ENST00000607478 399 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 AL359513.1-201ENST00000614364 557 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 AC007204.2-201ENST00000615022 616 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 MIR6839-201ENST00000620425 113 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 AC006840.1-201ENST00000623069 542 ntBASIC5.42□□□□□ -1.54
PTPN3P26045 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN3P26045 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN3P26045 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN3P26045 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN3P26045 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN3P26045 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN3P26045 MUC2-202ENST00000613187 4845 ntBASIC5.41□□□□□ -1.54
PTPN3P26045 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PTPN3P26045 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN3P26045 AL022311.1-201ENST00000623726 19416 ntBASIC5.41□□□□□ -1.54
PTPN3P26045 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN3P26045 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN3P26045 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN3P26045 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN3P26045 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms