Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 RPL32P9-201ENST00000487963 407 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 AC073610.1-201ENST00000489971 396 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC8.01□□□□□ -1.13
COL9A1P20849 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC8.01□□□□□ -1.13
COL9A1P20849 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 RNU4-29P-201ENST00000515943 174 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 RNU6-1143P-201ENST00000516125 104 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 Y_RNA.665-201ENST00000516177 98 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 RNU6-864P-201ENST00000516256 108 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 Y_RNA.682-201ENST00000516457 100 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 RGS4-209ENST00000531057 544 ntTSL 4 BASIC8.01□□□□□ -1.13
COL9A1P20849 AP004609.2-201ENST00000532177 190 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC8.01□□□□□ -1.13
COL9A1P20849 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC8.01□□□□□ -1.13
COL9A1P20849 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC8.01□□□□□ -1.13
COL9A1P20849 AC016727.2-201ENST00000603988 621 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC8.01□□□□□ -1.13
COL9A1P20849 ZWILCH-201ENST00000307897 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC8.01□□□□□ -1.13
COL9A1P20849 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC8.01□□□□□ -1.13
COL9A1P20849 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
COL9A1P20849 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.01□□□□□ -1.13
COL9A1P20849 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC8.01□□□□□ -1.13
COL9A1P20849 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
COL9A1P20849 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL9A1P20849 THAP12P1-201ENST00000398672 2203 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC8.01□□□□□ -1.13
COL9A1P20849 AC136428.3-201ENST00000566387 1990 ntBASIC8.01□□□□□ -1.13
COL9A1P20849 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL9A1P20849 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC8□□□□□ -1.13
COL9A1P20849 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
COL9A1P20849 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
COL9A1P20849 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC8□□□□□ -1.13
COL9A1P20849 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL9A1P20849 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC8□□□□□ -1.13
COL9A1P20849 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL9A1P20849 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL9A1P20849 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8□□□□□ -1.13
COL9A1P20849 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
COL9A1P20849 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL9A1P20849 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC8□□□□□ -1.13
COL9A1P20849 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
COL9A1P20849 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL9A1P20849 Y_RNA.5-201ENST00000362334 102 ntBASIC8□□□□□ -1.13
COL9A1P20849 RNU6-1188P-201ENST00000363795 107 ntBASIC8□□□□□ -1.13
COL9A1P20849 SNORA10-201ENST00000384084 133 ntBASIC8□□□□□ -1.13
COL9A1P20849 LDHAP5-201ENST00000394996 622 ntBASIC8□□□□□ -1.13
COL9A1P20849 PDCL3P5-201ENST00000398028 722 ntBASIC8□□□□□ -1.13
COL9A1P20849 AL121972.1-201ENST00000402023 252 ntBASIC8□□□□□ -1.13
COL9A1P20849 AL049697.2-201ENST00000403708 294 ntBASIC8□□□□□ -1.13
COL9A1P20849 RNA5SP177-201ENST00000410122 107 ntBASIC8□□□□□ -1.13
COL9A1P20849 RN7SKP229-201ENST00000410465 302 ntBASIC8□□□□□ -1.13
COL9A1P20849 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC8□□□□□ -1.13
COL9A1P20849 RPL31P12-201ENST00000422587 358 ntBASIC8□□□□□ -1.13
COL9A1P20849 CYP4F34P-201ENST00000425951 481 ntBASIC8□□□□□ -1.13
COL9A1P20849 NRBF2P3-201ENST00000432731 865 ntBASIC8□□□□□ -1.13
COL9A1P20849 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8□□□□□ -1.13
COL9A1P20849 RSU1P2-202ENST00000437884 485 ntBASIC8□□□□□ -1.13
COL9A1P20849 AC079781.2-201ENST00000446424 169 ntBASIC8□□□□□ -1.13
COL9A1P20849 RPS27AP15-201ENST00000447672 466 ntBASIC8□□□□□ -1.13
COL9A1P20849 RPL31P44-201ENST00000447680 377 ntBASIC8□□□□□ -1.13
COL9A1P20849 MRPS31P2-201ENST00000451581 518 ntBASIC8□□□□□ -1.13
COL9A1P20849 RPL30P15-201ENST00000457129 321 ntBASIC8□□□□□ -1.13
COL9A1P20849 RPL5P30-201ENST00000465511 891 ntBASIC8□□□□□ -1.13
COL9A1P20849 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8□□□□□ -1.13
COL9A1P20849 AC068781.1-201ENST00000488231 618 ntBASIC8□□□□□ -1.13
COL9A1P20849 RN7SL350P-201ENST00000492591 299 ntBASIC8□□□□□ -1.13
COL9A1P20849 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC8□□□□□ -1.13
COL9A1P20849 OR4C7P-201ENST00000533375 919 ntBASIC8□□□□□ -1.13
COL9A1P20849 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC8□□□□□ -1.13
COL9A1P20849 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL9A1P20849 AC068831.4-201ENST00000556118 109 ntBASIC8□□□□□ -1.13
COL9A1P20849 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC8□□□□□ -1.13
COL9A1P20849 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC8□□□□□ -1.13
COL9A1P20849 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC8□□□□□ -1.13
COL9A1P20849 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC8□□□□□ -1.13
COL9A1P20849 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC8□□□□□ -1.13
COL9A1P20849 AC036176.3-201ENST00000602456 418 ntBASIC8□□□□□ -1.13
COL9A1P20849 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC8□□□□□ -1.13
COL9A1P20849 AL355810.1-201ENST00000614629 552 ntBASIC8□□□□□ -1.13
COL9A1P20849 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC8□□□□□ -1.13
COL9A1P20849 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC8□□□□□ -1.13
COL9A1P20849 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC8□□□□□ -1.13
COL9A1P20849 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC8□□□□□ -1.13
COL9A1P20849 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
COL9A1P20849 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
COL9A1P20849 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8□□□□□ -1.13
COL9A1P20849 LRRC4C-203ENST00000528697 2650 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
COL9A1P20849 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
COL9A1P20849 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
COL9A1P20849 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms