Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SNORA48.4-201ENST00000391089 134 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 EI24P3-201ENST00000399046 1062 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 RNA5SP487-201ENST00000410186 122 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 RPL7AP49-201ENST00000429522 581 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AL591438.1-201ENST00000433508 581 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 MTND2P2-201ENST00000434633 945 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 ARL5AP3-201ENST00000439327 386 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 TXNP2-201ENST00000443918 295 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 CALM1P2-201ENST00000452941 448 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 RPL35AP19-201ENST00000469425 329 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 RN7SL447P-201ENST00000494711 245 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 IGBP1P4-201ENST00000503202 879 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AC021193.1-201ENST00000511607 420 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AP004607.2-201ENST00000533949 322 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 BLZF2P-201ENST00000553776 1130 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AC084373.1-201ENST00000603311 235 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AC009027.1-201ENST00000604510 479 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 HMGB1P51-201ENST00000605166 638 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AC034236.3-201ENST00000605999 461 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AC002044.3-201ENST00000623314 541 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AP003400.3-201ENST00000624904 346 ntBASIC5.43□□□□□ -1.54
HLA-DPA1P20036 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-DPA1P20036 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 NLRP3P1-201ENST00000622303 1785 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 MUC2-202ENST00000613187 4845 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 RNU1-19P-201ENST00000363306 165 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 GNG5P5-201ENST00000420444 220 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 MRPS21P2-201ENST00000424704 264 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 XKRYP6-201ENST00000440468 1116 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 XKRYP3-201ENST00000442113 1116 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 OR52A4P-203ENST00000498233 1014 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 SNORA70.17-201ENST00000516449 133 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 IGHV3-63-201ENST00000518422 341 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AC022360.1-201ENST00000521058 340 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AC007225.2-201ENST00000562529 256 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AL137072.1-201ENST00000603444 466 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 BNIP3P7-201ENST00000605641 516 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AC079395.2-201ENST00000610982 737 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 WBP1LP8-201ENST00000617401 327 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AP003499.2-201ENST00000624100 483 ntBASIC5.42□□□□□ -1.54
HLA-DPA1P20036 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DPA1P20036 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 RNA5SP335-201ENST00000363817 110 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 RNA5SP132-201ENST00000364725 118 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AL133388.1-201ENST00000404509 287 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AC006065.1-201ENST00000422539 802 ntBASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.41□□□□□ -1.54
HLA-DPA1P20036 AC124944.2-201ENST00000429866 1242 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms