Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPRFP10586 AL359757.1-201ENST00000623176 255 ntBASIC5.78□□□□□ -1.48
PTPRFP10586 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPRFP10586 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPRFP10586 KARSP3-201ENST00000571212 1504 ntBASIC5.78□□□□□ -1.48
PTPRFP10586 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPRFP10586 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPRFP10586 ECM1P2-201ENST00000503354 1577 ntBASIC5.78□□□□□ -1.48
PTPRFP10586 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.78□□□□□ -1.48
PTPRFP10586 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPRFP10586 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PTPRFP10586 Z95114.1-201ENST00000624264 14574 ntBASIC5.78□□□□□ -1.48
PTPRFP10586 AL137100.1-201ENST00000556703 1620 ntBASIC5.78□□□□□ -1.48
PTPRFP10586 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPRFP10586 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPRFP10586 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPRFP10586 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPRFP10586 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PTPRFP10586 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
PTPRFP10586 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
PTPRFP10586 RPS3AP23-201ENST00000401762 784 ntBASIC5.78□□□□□ -1.48
PTPRFP10586 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.78□□□□□ -1.48
PTPRFP10586 COX6CP17-201ENST00000421389 185 ntBASIC5.78□□□□□ -1.48
PTPRFP10586 AC116562.1-201ENST00000485355 781 ntBASIC5.78□□□□□ -1.48
PTPRFP10586 AC011005.3-201ENST00000491624 395 ntBASIC5.78□□□□□ -1.48
PTPRFP10586 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPRFP10586 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPRFP10586 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.78□□□□□ -1.48
PTPRFP10586 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PTPRFP10586 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PTPRFP10586 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPRFP10586 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.77□□□□□ -1.49
PTPRFP10586 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPRFP10586 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PTPRFP10586 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.77□□□□□ -1.49
PTPRFP10586 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 AL031123.3-201ENST00000623345 1837 ntBASIC5.77□□□□□ -1.49
PTPRFP10586 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPRFP10586 AC009480.2-201ENST00000422916 432 ntBASIC5.77□□□□□ -1.49
PTPRFP10586 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPRFP10586 AC005154.2-201ENST00000438110 379 ntBASIC5.77□□□□□ -1.49
PTPRFP10586 AL161722.1-201ENST00000446972 1032 ntBASIC5.77□□□□□ -1.49
PTPRFP10586 HMGB1P4-201ENST00000455362 567 ntBASIC5.77□□□□□ -1.49
PTPRFP10586 SNRPCP3-201ENST00000474888 476 ntBASIC5.77□□□□□ -1.49
PTPRFP10586 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.77□□□□□ -1.49
PTPRFP10586 MIR7853-201ENST00000584820 132 ntBASIC5.77□□□□□ -1.49
PTPRFP10586 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.77□□□□□ -1.49
PTPRFP10586 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 ADAM24P-201ENST00000398655 2101 ntBASIC5.77□□□□□ -1.49
PTPRFP10586 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
PTPRFP10586 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPRFP10586 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTPRFP10586 RPL7AP49-201ENST00000429522 581 ntBASIC5.76□□□□□ -1.49
PTPRFP10586 AL591438.1-201ENST00000433508 581 ntBASIC5.76□□□□□ -1.49
PTPRFP10586 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.76□□□□□ -1.49
PTPRFP10586 AL049839.1-201ENST00000556151 657 ntBASIC5.76□□□□□ -1.49
PTPRFP10586 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPRFP10586 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPRFP10586 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPRFP10586 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PTPRFP10586 AC091932.2-201ENST00000623014 291 ntBASIC5.76□□□□□ -1.49
PTPRFP10586 AC011944.2-201ENST00000624440 683 ntBASIC5.76□□□□□ -1.49
PTPRFP10586 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTPRFP10586 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PTPRFP10586 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPRFP10586 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPRFP10586 NCLP2-201ENST00000416078 1462 ntBASIC5.76□□□□□ -1.49
PTPRFP10586 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPRFP10586 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPRFP10586 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPRFP10586 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPRFP10586 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPRFP10586 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPRFP10586 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPRFP10586 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPRFP10586 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTPRFP10586 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTPRFP10586 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPRFP10586 AL354868.1-201ENST00000417077 482 ntBASIC5.76□□□□□ -1.49
PTPRFP10586 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPRFP10586 AC099670.2-201ENST00000435130 321 ntBASIC5.76□□□□□ -1.49
PTPRFP10586 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPRFP10586 AC023271.1-201ENST00000445936 1090 ntBASIC5.76□□□□□ -1.49
PTPRFP10586 RN7SL319P-201ENST00000480656 221 ntBASIC5.76□□□□□ -1.49
PTPRFP10586 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.76□□□□□ -1.49
PTPRFP10586 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPRFP10586 AL034374.2-201ENST00000605281 548 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms