Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.87□□□□□ -1.47
MMP3P08254 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.87□□□□□ -1.47
MMP3P08254 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.87□□□□□ -1.47
MMP3P08254 AC040174.2-201ENST00000602701 465 ntBASIC5.87□□□□□ -1.47
MMP3P08254 AL583832.1-201ENST00000603227 784 ntBASIC5.87□□□□□ -1.47
MMP3P08254 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.87□□□□□ -1.47
MMP3P08254 AL590396.2-201ENST00000636511 1041 ntBASIC5.87□□□□□ -1.47
MMP3P08254 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
MMP3P08254 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.87□□□□□ -1.47
MMP3P08254 AC100757.1-201ENST00000616872 1835 ntBASIC5.87□□□□□ -1.47
MMP3P08254 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.87□□□□□ -1.47
MMP3P08254 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
MMP3P08254 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MMP3P08254 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MMP3P08254 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MMP3P08254 AC009962.1-201ENST00000567327 3813 ntBASIC5.86□□□□□ -1.47
MMP3P08254 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.86□□□□□ -1.47
MMP3P08254 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.86□□□□□ -1.47
MMP3P08254 AC232271.1-201ENST00000602455 2715 ntBASIC5.86□□□□□ -1.47
MMP3P08254 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
MMP3P08254 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
MMP3P08254 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MMP3P08254 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MMP3P08254 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
MMP3P08254 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MMP3P08254 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.86□□□□□ -1.47
MMP3P08254 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
MMP3P08254 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MMP3P08254 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
MMP3P08254 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.86□□□□□ -1.47
MMP3P08254 AL078599.1-201ENST00000402075 293 ntBASIC5.86□□□□□ -1.47
MMP3P08254 MTND4LP17-201ENST00000414607 293 ntBASIC5.86□□□□□ -1.47
MMP3P08254 RCC2P2-201ENST00000422174 918 ntBASIC5.86□□□□□ -1.47
MMP3P08254 DDX39BP1-205ENST00000422507 192 ntBASIC5.86□□□□□ -1.47
MMP3P08254 HSFY1P1-201ENST00000423928 1178 ntBASIC5.86□□□□□ -1.47
MMP3P08254 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.86□□□□□ -1.47
MMP3P08254 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.86□□□□□ -1.47
MMP3P08254 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.86□□□□□ -1.47
MMP3P08254 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.86□□□□□ -1.47
MMP3P08254 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.86□□□□□ -1.47
MMP3P08254 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.86□□□□□ -1.47
MMP3P08254 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.86□□□□□ -1.47
MMP3P08254 CAB39P1-201ENST00000502277 460 ntBASIC5.86□□□□□ -1.47
MMP3P08254 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MMP3P08254 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.86□□□□□ -1.47
MMP3P08254 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.86□□□□□ -1.47
MMP3P08254 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MMP3P08254 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MMP3P08254 AC005000.1-201ENST00000536192 288 ntBASIC5.86□□□□□ -1.47
MMP3P08254 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.86□□□□□ -1.47
MMP3P08254 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.86□□□□□ -1.47
MMP3P08254 PCNPP1-201ENST00000552501 511 ntBASIC5.86□□□□□ -1.47
MMP3P08254 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.86□□□□□ -1.47
MMP3P08254 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.86□□□□□ -1.47
MMP3P08254 LINC00557-201ENST00000563184 1279 ntBASIC5.86□□□□□ -1.47
MMP3P08254 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.86□□□□□ -1.47
MMP3P08254 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.86□□□□□ -1.47
MMP3P08254 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.86□□□□□ -1.47
MMP3P08254 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.86□□□□□ -1.47
MMP3P08254 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
MMP3P08254 OR4H6P-202ENST00000603819 340 ntBASIC5.86□□□□□ -1.47
MMP3P08254 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MMP3P08254 EIF3FP1-201ENST00000613970 806 ntBASIC5.86□□□□□ -1.47
MMP3P08254 AC015712.7-201ENST00000615211 635 ntBASIC5.86□□□□□ -1.47
MMP3P08254 AC091905.4-201ENST00000623432 202 ntBASIC5.86□□□□□ -1.47
MMP3P08254 AC006453.5-201ENST00000636451 619 ntBASIC5.86□□□□□ -1.47
MMP3P08254 AC135068.12-201ENST00000637370 931 ntBASIC5.86□□□□□ -1.47
MMP3P08254 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MMP3P08254 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
MMP3P08254 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MMP3P08254 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
MMP3P08254 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.86□□□□□ -1.47
MMP3P08254 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.86□□□□□ -1.47
MMP3P08254 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.86□□□□□ -1.47
MMP3P08254 AP004289.1-201ENST00000436307 2205 ntBASIC5.86□□□□□ -1.47
MMP3P08254 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
MMP3P08254 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MMP3P08254 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MMP3P08254 AL513548.1-201ENST00000562904 1724 ntBASIC5.85□□□□□ -1.47
MMP3P08254 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MMP3P08254 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.85□□□□□ -1.47
MMP3P08254 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.85□□□□□ -1.47
MMP3P08254 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
MMP3P08254 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.85□□□□□ -1.47
MMP3P08254 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MMP3P08254 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MMP3P08254 SNORA56-201ENST00000383966 129 ntBASIC5.85□□□□□ -1.47
MMP3P08254 SNORA70.9-201ENST00000384370 135 ntBASIC5.85□□□□□ -1.47
MMP3P08254 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
MMP3P08254 U3.28-201ENST00000391249 210 ntBASIC5.85□□□□□ -1.47
MMP3P08254 AL035419.1-201ENST00000397037 564 ntBASIC5.85□□□□□ -1.47
MMP3P08254 GJA6P-201ENST00000415117 1042 ntBASIC5.85□□□□□ -1.47
MMP3P08254 AL049745.1-201ENST00000433953 286 ntBASIC5.85□□□□□ -1.47
MMP3P08254 SCAND3P1-201ENST00000439854 1060 ntBASIC5.85□□□□□ -1.47
MMP3P08254 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.85□□□□□ -1.47
MMP3P08254 MTND2P25-201ENST00000449028 610 ntBASIC5.85□□□□□ -1.47
MMP3P08254 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.85□□□□□ -1.47
MMP3P08254 AP000797.2-201ENST00000475768 606 ntBASIC5.85□□□□□ -1.47
MMP3P08254 NPM1P28-201ENST00000492269 840 ntBASIC5.85□□□□□ -1.47
MMP3P08254 RN7SL591P-201ENST00000496150 292 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms