Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC068993.1-201ENST00000546724 589 ntBASIC5.43□□□□□ -1.54
RETP07949 AGGF1P7-201ENST00000562369 913 ntBASIC5.43□□□□□ -1.54
RETP07949 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.43□□□□□ -1.54
RETP07949 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.43□□□□□ -1.54
RETP07949 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.43□□□□□ -1.54
RETP07949 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RETP07949 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RETP07949 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.43□□□□□ -1.54
RETP07949 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
RETP07949 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RETP07949 PWAR1-201ENST00000624188 2414 ntBASIC5.43□□□□□ -1.54
RETP07949 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.43□□□□□ -1.54
RETP07949 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.43□□□□□ -1.54
RETP07949 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RETP07949 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RETP07949 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.42□□□□□ -1.54
RETP07949 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RETP07949 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RETP07949 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RETP07949 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RETP07949 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RETP07949 RNU1-32P-201ENST00000363937 159 ntBASIC5.42□□□□□ -1.54
RETP07949 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.42□□□□□ -1.54
RETP07949 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RETP07949 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
RETP07949 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RETP07949 GPS2P1-201ENST00000411761 986 ntBASIC5.42□□□□□ -1.54
RETP07949 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.42□□□□□ -1.54
RETP07949 RPL5P25-201ENST00000441148 775 ntBASIC5.42□□□□□ -1.54
RETP07949 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.42□□□□□ -1.54
RETP07949 AC011753.3-201ENST00000443436 406 ntBASIC5.42□□□□□ -1.54
RETP07949 LINC02210-201ENST00000444561 288 ntBASIC5.42□□□□□ -1.54
RETP07949 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.42□□□□□ -1.54
RETP07949 DUTP1-201ENST00000493631 470 ntBASIC5.42□□□□□ -1.54
RETP07949 RPSAP51-201ENST00000497462 645 ntBASIC5.42□□□□□ -1.54
RETP07949 RPS4XP20-201ENST00000505751 772 ntBASIC5.42□□□□□ -1.54
RETP07949 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.42□□□□□ -1.54
RETP07949 AP000859.1-201ENST00000525536 307 ntBASIC5.42□□□□□ -1.54
RETP07949 OR4A17P-201ENST00000526032 904 ntBASIC5.42□□□□□ -1.54
RETP07949 AC024940.3-201ENST00000538551 316 ntBASIC5.42□□□□□ -1.54
RETP07949 AC137627.1-201ENST00000545761 289 ntBASIC5.42□□□□□ -1.54
RETP07949 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.42□□□□□ -1.54
RETP07949 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.42□□□□□ -1.54
RETP07949 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RETP07949 AL451049.1-201ENST00000608672 497 ntBASIC5.42□□□□□ -1.54
RETP07949 AL162574.1-201ENST00000615702 950 ntBASIC5.42□□□□□ -1.54
RETP07949 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RETP07949 AL138820.1-201ENST00000617901 5305 ntBASIC5.42□□□□□ -1.54
RETP07949 AP001029.2-203ENST00000589795 4910 ntBASIC5.42□□□□□ -1.54
RETP07949 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RETP07949 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RETP07949 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RETP07949 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RETP07949 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RETP07949 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
RETP07949 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RETP07949 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RETP07949 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.41□□□□□ -1.54
RETP07949 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
RETP07949 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.41□□□□□ -1.54
RETP07949 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RETP07949 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.41□□□□□ -1.54
RETP07949 AC079809.1-201ENST00000415468 276 ntBASIC5.41□□□□□ -1.54
RETP07949 HMGN2P27-201ENST00000427352 270 ntBASIC5.41□□□□□ -1.54
RETP07949 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.41□□□□□ -1.54
RETP07949 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.41□□□□□ -1.54
RETP07949 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.41□□□□□ -1.54
RETP07949 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.41□□□□□ -1.54
RETP07949 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.41□□□□□ -1.54
RETP07949 snoU13.20-201ENST00000459180 104 ntBASIC5.41□□□□□ -1.54
RETP07949 RPS7P6-201ENST00000485777 579 ntBASIC5.41□□□□□ -1.54
RETP07949 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RETP07949 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.41□□□□□ -1.54
RETP07949 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.41□□□□□ -1.54
RETP07949 SEPT10P1-201ENST00000517342 1162 ntBASIC5.41□□□□□ -1.54
RETP07949 IGLV3-24-201ENST00000517477 197 ntBASIC5.41□□□□□ -1.54
RETP07949 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.41□□□□□ -1.54
RETP07949 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.41□□□□□ -1.54
RETP07949 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RETP07949 AC127381.1-201ENST00000555979 939 ntBASIC5.41□□□□□ -1.54
RETP07949 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.41□□□□□ -1.54
RETP07949 AC090286.3-201ENST00000573133 187 ntBASIC5.41□□□□□ -1.54
RETP07949 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.41□□□□□ -1.54
RETP07949 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RETP07949 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RETP07949 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RETP07949 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RETP07949 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RETP07949 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RETP07949 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RETP07949 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RETP07949 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RETP07949 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.41□□□□□ -1.54
RETP07949 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RETP07949 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.41□□□□□ -1.54
RETP07949 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RETP07949 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.41□□□□□ -1.54
RETP07949 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RETP07949 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RETP07949 AC006206.1-201ENST00000544842 3387 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms