Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC008536.1-201ENST00000602872 669 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.43□□□□□ -1.38
HLA-DOAP06340 AC009464.1-201ENST00000615731 469 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 Z99129.2-201ENST00000619967 314 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.43□□□□□ -1.38
HLA-DOAP06340 CYP4F35P-202ENST00000636121 390 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DOAP06340 AC006600.2-201ENST00000624834 2506 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DOAP06340 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DOAP06340 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HLA-DOAP06340 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HLA-DOAP06340 CASC19-255ENST00000641733 1385 ntBASIC6.43□□□□□ -1.38
HLA-DOAP06340 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
HLA-DOAP06340 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DOAP06340 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DOAP06340 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 AP001157.1-201ENST00000550837 2339 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 OR55B1P-203ENST00000641518 2602 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DOAP06340 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DOAP06340 RNU1-43P-201ENST00000365052 165 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DOAP06340 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DOAP06340 AL645927.1-201ENST00000396783 406 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 NPM1P22-201ENST00000427761 952 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 RPS27P18-201ENST00000431701 247 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 MTND2P8-201ENST00000450555 1025 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 AZGP1P2-201ENST00000454506 345 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 DUXAP8-207ENST00000456786 622 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 RN7SKP67-201ENST00000515905 235 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 RN7SKP265-201ENST00000516448 223 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 EEF1A1P37-201ENST00000522748 715 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 MORF4L1P3-201ENST00000525966 950 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 DUXAP5-201ENST00000529668 529 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 AC087888.1-201ENST00000550884 1254 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 DUXAP10-204ENST00000612052 616 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 AC084824.4-201ENST00000620106 731 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 AL359955.1-201ENST00000455242 3275 ntBASIC6.42□□□□□ -1.38
HLA-DOAP06340 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DOAP06340 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DOAP06340 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DOAP06340 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DOAP06340 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.42□□□□□ -1.38
HLA-DOAP06340 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HLA-DOAP06340 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DOAP06340 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC012321.1-201ENST00000561622 1588 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 RNU6-40P-201ENST00000384254 107 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 MIR765-201ENST00000390226 114 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 ELOCP3-201ENST00000439303 348 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 MTND2P22-201ENST00000444325 1033 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AL009048.1-201ENST00000450437 298 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AL389915.2-201ENST00000454576 441 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 MTND2P6-201ENST00000455337 1030 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC104164.3-201ENST00000467363 1258 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 RN7SL329P-201ENST00000467740 299 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 RPL7P6-201ENST00000480903 738 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC093270.2-201ENST00000486157 792 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC005412.2-201ENST00000492004 341 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 AC015864.1-201ENST00000496512 544 ntBASIC6.41□□□□□ -1.38
HLA-DOAP06340 MTCYBP35-201ENST00000503630 1137 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms