Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 CHEK2P5-201ENST00000423877 246 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 CYCSP6-201ENST00000434498 302 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 CLUHP1-201ENST00000435012 1190 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC112206.1-201ENST00000468416 477 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC058823.1-201ENST00000485315 474 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC006427.1-201ENST00000514359 712 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 RNA5SP249-201ENST00000516127 99 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC027308.1-201ENST00000517993 110 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 RPL23AP53-201ENST00000521854 457 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 BLZF2P-201ENST00000553776 1130 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 RBM22P1-201ENST00000578589 1214 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC060766.1-201ENST00000590824 627 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC107993.1-201ENST00000591343 684 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC011445.2-201ENST00000599274 173 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC079395.2-201ENST00000610982 737 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AL359513.1-201ENST00000614364 557 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC007204.2-201ENST00000615022 616 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 BRAFP1-201ENST00000445336 2703 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 AC139713.2-215ENST00000641428 5037 ntBASIC4.61□□□□□ -1.67
HLA-DPB1P04440 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-DPB1P04440 SCARNA15-201ENST00000607520 4325 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 MIR133B-201ENST00000362210 119 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 RN7SKP59-201ENST00000410520 314 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 GAPDHP25-201ENST00000447061 1001 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AC007386.1-201ENST00000455212 582 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AC093166.2-201ENST00000455969 1017 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AC090686.1-201ENST00000481577 749 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 EIF1P7-201ENST00000487533 337 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 BTG4P1-201ENST00000510421 183 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 EIF4A2P5-201ENST00000529914 499 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 OOSP1P2-201ENST00000579644 351 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AC233702.9-201ENST00000581528 203 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AL161912.3-201ENST00000605404 628 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 MTCO1P1-201ENST00000624263 1081 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.6□□□□□ -1.67
HLA-DPB1P04440 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-DPB1P04440 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 RNA5SP335-201ENST00000363817 110 ntBASIC4.59□□□□□ -1.67
HLA-DPB1P04440 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-DPB1P04440 U3.25-201ENST00000391209 220 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms