Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.69□□□□□ -1.5
CHRNA1P02708 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.69□□□□□ -1.5
CHRNA1P02708 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CHRNA1P02708 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CHRNA1P02708 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.68□□□□□ -1.5
CHRNA1P02708 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CHRNA1P02708 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CHRNA1P02708 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.68□□□□□ -1.5
CHRNA1P02708 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
CHRNA1P02708 AC092681.1-201ENST00000297369 291 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.68□□□□□ -1.5
CHRNA1P02708 RN7SKP149-201ENST00000363008 344 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 RNVU1-6-201ENST00000364688 164 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 RNA5SP428-201ENST00000365129 132 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 AL807761.1-201ENST00000417622 171 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 BX276092.6-201ENST00000430476 250 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.68□□□□□ -1.5
CHRNA1P02708 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.68□□□□□ -1.5
CHRNA1P02708 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.68□□□□□ -1.5
CHRNA1P02708 AC073072.2-201ENST00000447425 348 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 CBX1P2-201ENST00000453841 458 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 BX276092.8-201ENST00000455722 250 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 RPS29P33-201ENST00000456717 146 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.68□□□□□ -1.5
CHRNA1P02708 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.68□□□□□ -1.5
CHRNA1P02708 BTF3P13-201ENST00000513224 490 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CHRNA1P02708 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.68□□□□□ -1.5
CHRNA1P02708 AC108738.1-201ENST00000603703 237 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 OR8G7P-201ENST00000616658 848 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CHRNA1P02708 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNA1P02708 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNA1P02708 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.68□□□□□ -1.5
CHRNA1P02708 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNA1P02708 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.68□□□□□ -1.5
CHRNA1P02708 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.68□□□□□ -1.5
CHRNA1P02708 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.68□□□□□ -1.5
CHRNA1P02708 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.68□□□□□ -1.5
CHRNA1P02708 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNA1P02708 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CHRNA1P02708 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.67□□□□□ -1.5
CHRNA1P02708 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.67□□□□□ -1.5
CHRNA1P02708 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNA1P02708 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNA1P02708 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CHRNA1P02708 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNA1P02708 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
CHRNA1P02708 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNA1P02708 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.67□□□□□ -1.5
CHRNA1P02708 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNA1P02708 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNA1P02708 RNU6-249P-201ENST00000363016 102 ntBASIC5.67□□□□□ -1.5
CHRNA1P02708 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CHRNA1P02708 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CHRNA1P02708 AC136624.1-201ENST00000400791 413 ntBASIC5.67□□□□□ -1.5
CHRNA1P02708 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.67□□□□□ -1.5
CHRNA1P02708 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.67□□□□□ -1.5
CHRNA1P02708 AC124944.2-201ENST00000429866 1242 ntBASIC5.67□□□□□ -1.5
CHRNA1P02708 NOP56P2-201ENST00000447491 769 ntBASIC5.67□□□□□ -1.5
CHRNA1P02708 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.67□□□□□ -1.5
CHRNA1P02708 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.67□□□□□ -1.5
CHRNA1P02708 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.67□□□□□ -1.5
CHRNA1P02708 AC006427.1-201ENST00000514359 712 ntBASIC5.67□□□□□ -1.5
CHRNA1P02708 RN7SKP260-201ENST00000516907 149 ntBASIC5.67□□□□□ -1.5
CHRNA1P02708 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.67□□□□□ -1.5
CHRNA1P02708 AC021006.3-201ENST00000530771 192 ntBASIC5.67□□□□□ -1.5
CHRNA1P02708 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.67□□□□□ -1.5
CHRNA1P02708 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.67□□□□□ -1.5
CHRNA1P02708 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.67□□□□□ -1.5
CHRNA1P02708 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.67□□□□□ -1.5
CHRNA1P02708 AC087283.1-201ENST00000604029 1074 ntBASIC5.67□□□□□ -1.5
CHRNA1P02708 MEMO1P5-201ENST00000604810 406 ntBASIC5.67□□□□□ -1.5
CHRNA1P02708 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.67□□□□□ -1.5
CHRNA1P02708 AL356752.1-201ENST00000615844 593 ntBASIC5.67□□□□□ -1.5
CHRNA1P02708 AC016745.2-201ENST00000608834 3443 ntBASIC5.67□□□□□ -1.5
CHRNA1P02708 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CHRNA1P02708 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.67□□□□□ -1.5
CHRNA1P02708 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CHRNA1P02708 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CHRNA1P02708 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.67□□□□□ -1.5
CHRNA1P02708 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CHRNA1P02708 AC079298.1-201ENST00000625026 1619 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA1P02708 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA1P02708 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA1P02708 CDC27P2-201ENST00000425026 1922 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA1P02708 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CHRNA1P02708 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CHRNA1P02708 AC132825.1-201ENST00000463573 2247 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 AC093849.1-201ENST00000563631 2209 ntBASIC5.66□□□□□ -1.5
CHRNA1P02708 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CHRNA1P02708 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms