Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.09□□□□□ -1.43
COL1A1P02452 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL1A1P02452 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL1A1P02452 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL1A1P02452 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL1A1P02452 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL1A1P02452 AC092451.3-201ENST00000625067 1343 ntBASIC6.09□□□□□ -1.43
COL1A1P02452 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
COL1A1P02452 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
COL1A1P02452 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
COL1A1P02452 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL1A1P02452 HMGB3P7-201ENST00000400214 611 ntBASIC6.09□□□□□ -1.44
COL1A1P02452 RPS16P5-201ENST00000406501 404 ntBASIC6.09□□□□□ -1.44
COL1A1P02452 GTF2IP5-201ENST00000414608 731 ntBASIC6.09□□□□□ -1.44
COL1A1P02452 DNAJC19P7-201ENST00000428811 344 ntBASIC6.09□□□□□ -1.44
COL1A1P02452 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.09□□□□□ -1.44
COL1A1P02452 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.09□□□□□ -1.44
COL1A1P02452 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
COL1A1P02452 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.09□□□□□ -1.44
COL1A1P02452 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.09□□□□□ -1.44
COL1A1P02452 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.09□□□□□ -1.44
COL1A1P02452 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.09□□□□□ -1.44
COL1A1P02452 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
COL1A1P02452 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL1A1P02452 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL1A1P02452 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.08□□□□□ -1.44
COL1A1P02452 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
COL1A1P02452 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL1A1P02452 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL1A1P02452 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL1A1P02452 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL1A1P02452 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.08□□□□□ -1.44
COL1A1P02452 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.08□□□□□ -1.44
COL1A1P02452 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.08□□□□□ -1.44
COL1A1P02452 SNORA62-201ENST00000365493 153 ntBASIC6.08□□□□□ -1.44
COL1A1P02452 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL1A1P02452 AC009963.4-201ENST00000448535 339 ntBASIC6.08□□□□□ -1.44
COL1A1P02452 OR52J1P-201ENST00000450596 932 ntBASIC6.08□□□□□ -1.44
COL1A1P02452 CYCSP42-201ENST00000450823 238 ntBASIC6.08□□□□□ -1.44
COL1A1P02452 BX842559.2-201ENST00000451418 605 ntBASIC6.08□□□□□ -1.44
COL1A1P02452 AC009963.2-201ENST00000453431 138 ntBASIC6.08□□□□□ -1.44
COL1A1P02452 RPL23AP72-201ENST00000492447 435 ntBASIC6.08□□□□□ -1.44
COL1A1P02452 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.08□□□□□ -1.44
COL1A1P02452 AC020937.1-201ENST00000519677 1013 ntBASIC6.08□□□□□ -1.44
COL1A1P02452 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.08□□□□□ -1.44
COL1A1P02452 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL1A1P02452 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
COL1A1P02452 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.08□□□□□ -1.44
COL1A1P02452 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL1A1P02452 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL1A1P02452 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL1A1P02452 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.07□□□□□ -1.44
COL1A1P02452 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL1A1P02452 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.07□□□□□ -1.44
COL1A1P02452 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL1A1P02452 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL1A1P02452 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL1A1P02452 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL1A1P02452 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.07□□□□□ -1.44
COL1A1P02452 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL1A1P02452 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL1A1P02452 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL1A1P02452 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL1A1P02452 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL1A1P02452 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.07□□□□□ -1.44
COL1A1P02452 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.07□□□□□ -1.44
COL1A1P02452 AL691482.1-201ENST00000453255 87 ntBASIC6.07□□□□□ -1.44
COL1A1P02452 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.07□□□□□ -1.44
COL1A1P02452 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.07□□□□□ -1.44
COL1A1P02452 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.07□□□□□ -1.44
COL1A1P02452 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.07□□□□□ -1.44
COL1A1P02452 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.07□□□□□ -1.44
COL1A1P02452 AC083809.1-201ENST00000615051 472 ntBASIC6.07□□□□□ -1.44
COL1A1P02452 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL1A1P02452 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.07□□□□□ -1.44
COL1A1P02452 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL1A1P02452 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL1A1P02452 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
COL1A1P02452 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL1A1P02452 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL1A1P02452 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL1A1P02452 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL1A1P02452 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL1A1P02452 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
COL1A1P02452 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
COL1A1P02452 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.06□□□□□ -1.44
COL1A1P02452 SAMM50P1-201ENST00000455403 1399 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 AC126755.2-208ENST00000327792 462 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 AC138969.1-213ENST00000331436 462 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.06□□□□□ -1.44
COL1A1P02452 OR1L6-202ENST00000373684 1044 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 SNORA70.10-201ENST00000384515 134 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 RPS3AP23-201ENST00000401762 784 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.06□□□□□ -1.44
COL1A1P02452 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.06□□□□□ -1.44
COL1A1P02452 AC009238.2-201ENST00000431026 355 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.06□□□□□ -1.44
COL1A1P02452 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 AC000111.2-201ENST00000448200 210 ntBASIC6.06□□□□□ -1.44
COL1A1P02452 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms