Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
MBD4O95243 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
MBD4O95243 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
MBD4O95243 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
MBD4O95243 AP002512.4-202ENST00000641599 4530 ntBASIC6.34□□□□□ -1.39
MBD4O95243 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
MBD4O95243 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
MBD4O95243 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
MBD4O95243 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.39
MBD4O95243 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
MBD4O95243 RN7SKP145-201ENST00000363291 303 ntBASIC6.34□□□□□ -1.39
MBD4O95243 U8.4-201ENST00000363626 134 ntBASIC6.34□□□□□ -1.39
MBD4O95243 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.34□□□□□ -1.39
MBD4O95243 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.34□□□□□ -1.39
MBD4O95243 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.34□□□□□ -1.39
MBD4O95243 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
MBD4O95243 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.34□□□□□ -1.39
MBD4O95243 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.34□□□□□ -1.39
MBD4O95243 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.34□□□□□ -1.39
MBD4O95243 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.34□□□□□ -1.39
MBD4O95243 AC023271.1-201ENST00000445936 1090 ntBASIC6.34□□□□□ -1.39
MBD4O95243 AL389915.2-201ENST00000454576 441 ntBASIC6.34□□□□□ -1.39
MBD4O95243 TAAR4P-201ENST00000454843 1039 ntBASIC6.34□□□□□ -1.39
MBD4O95243 Z92846.1-201ENST00000456203 268 ntBASIC6.34□□□□□ -1.39
MBD4O95243 EIF2S2P4-201ENST00000461070 984 ntBASIC6.34□□□□□ -1.39
MBD4O95243 RN7SL197P-201ENST00000466981 299 ntBASIC6.34□□□□□ -1.39
MBD4O95243 OR52A4P-202ENST00000481634 799 ntBASIC6.34□□□□□ -1.39
MBD4O95243 AC098799.1-201ENST00000504752 800 ntBASIC6.34□□□□□ -1.39
MBD4O95243 SEPT10P1-201ENST00000517342 1162 ntBASIC6.34□□□□□ -1.39
MBD4O95243 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.34□□□□□ -1.39
MBD4O95243 OR4A46P-201ENST00000527255 933 ntBASIC6.34□□□□□ -1.39
MBD4O95243 OR10G5P-201ENST00000532733 358 ntBASIC6.34□□□□□ -1.39
MBD4O95243 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.34□□□□□ -1.39
MBD4O95243 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.34□□□□□ -1.39
MBD4O95243 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.34□□□□□ -1.39
MBD4O95243 AC051619.2-201ENST00000559063 397 ntBASIC6.34□□□□□ -1.39
MBD4O95243 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.34□□□□□ -1.39
MBD4O95243 AC012414.2-201ENST00000559474 187 ntBASIC6.34□□□□□ -1.39
MBD4O95243 FAM106CP-201ENST00000582212 507 ntBASIC6.34□□□□□ -1.39
MBD4O95243 AC007448.1-201ENST00000582714 234 ntBASIC6.34□□□□□ -1.39
MBD4O95243 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.34□□□□□ -1.39
MBD4O95243 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.34□□□□□ -1.39
MBD4O95243 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.34□□□□□ -1.39
MBD4O95243 AC010632.3-201ENST00000611377 369 ntBASIC6.34□□□□□ -1.39
MBD4O95243 AC105105.5-201ENST00000622635 1294 ntBASIC6.34□□□□□ -1.39
MBD4O95243 AC016745.2-201ENST00000608834 3443 ntBASIC6.34□□□□□ -1.39
MBD4O95243 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
MBD4O95243 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.34□□□□□ -1.39
MBD4O95243 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
MBD4O95243 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
MBD4O95243 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
MBD4O95243 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.34□□□□□ -1.4
MBD4O95243 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.33□□□□□ -1.4
MBD4O95243 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
MBD4O95243 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
MBD4O95243 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
MBD4O95243 AC092747.4-201ENST00000620519 1861 ntBASIC6.33□□□□□ -1.4
MBD4O95243 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
MBD4O95243 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
MBD4O95243 RNU1-106P-201ENST00000384382 164 ntBASIC6.33□□□□□ -1.4
MBD4O95243 RNU6-1320P-201ENST00000390838 107 ntBASIC6.33□□□□□ -1.4
MBD4O95243 RNU6-1269P-201ENST00000391139 107 ntBASIC6.33□□□□□ -1.4
MBD4O95243 GAPDHP15-201ENST00000398586 975 ntBASIC6.33□□□□□ -1.4
MBD4O95243 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.33□□□□□ -1.4
MBD4O95243 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.33□□□□□ -1.4
MBD4O95243 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.33□□□□□ -1.4
MBD4O95243 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.33□□□□□ -1.4
MBD4O95243 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.33□□□□□ -1.4
MBD4O95243 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 AL513343.1-201ENST00000451818 792 ntBASIC6.33□□□□□ -1.4
MBD4O95243 MTND2P3-201ENST00000452458 470 ntBASIC6.33□□□□□ -1.4
MBD4O95243 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.33□□□□□ -1.4
MBD4O95243 RNU6-599P-201ENST00000459383 107 ntBASIC6.33□□□□□ -1.4
MBD4O95243 RNU6-1193P-201ENST00000459461 107 ntBASIC6.33□□□□□ -1.4
MBD4O95243 AC009127.1-201ENST00000467090 155 ntBASIC6.33□□□□□ -1.4
MBD4O95243 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.33□□□□□ -1.4
MBD4O95243 RPL7P40-201ENST00000481703 745 ntBASIC6.33□□□□□ -1.4
MBD4O95243 RPL15P21-201ENST00000495592 567 ntBASIC6.33□□□□□ -1.4
MBD4O95243 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.33□□□□□ -1.4
MBD4O95243 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.33□□□□□ -1.4
MBD4O95243 AC092868.3-201ENST00000560515 784 ntBASIC6.33□□□□□ -1.4
MBD4O95243 MIR3691-201ENST00000578066 90 ntBASIC6.33□□□□□ -1.4
MBD4O95243 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
MBD4O95243 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.33□□□□□ -1.4
MBD4O95243 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.33□□□□□ -1.4
MBD4O95243 AL139407.1-201ENST00000613826 1175 ntBASIC6.33□□□□□ -1.4
MBD4O95243 RNU6-368P-201ENST00000620928 107 ntBASIC6.33□□□□□ -1.4
MBD4O95243 RNU6-538P-201ENST00000622329 107 ntBASIC6.33□□□□□ -1.4
MBD4O95243 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
MBD4O95243 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms