Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MIR3945-201ENST00000581853 98 ntBASIC2.17□□□□□ -2.06
USH2AO75445 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.17□□□□□ -2.06
USH2AO75445 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 AC007342.8-201ENST00000623278 678 ntBASIC2.17□□□□□ -2.06
USH2AO75445 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
USH2AO75445 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USH2AO75445 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
USH2AO75445 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC2.17□□□□□ -2.06
USH2AO75445 SLC2A3P1-201ENST00000519666 1451 ntBASIC2.17□□□□□ -2.06
USH2AO75445 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USH2AO75445 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.17□□□□□ -2.06
USH2AO75445 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
USH2AO75445 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USH2AO75445 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
USH2AO75445 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
USH2AO75445 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.17□□□□□ -2.06
USH2AO75445 AC079922.1-201ENST00000443291 359 ntBASIC2.17□□□□□ -2.06
USH2AO75445 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.17□□□□□ -2.06
USH2AO75445 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC2.17□□□□□ -2.06
USH2AO75445 AC122688.1-201ENST00000541494 223 ntBASIC2.17□□□□□ -2.06
USH2AO75445 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 SKA2-207ENST00000583380 583 ntTSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 BX005214.3-202ENST00000619809 325 ntBASIC2.17□□□□□ -2.06
USH2AO75445 AP003400.3-201ENST00000624904 346 ntBASIC2.17□□□□□ -2.06
USH2AO75445 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
USH2AO75445 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
USH2AO75445 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 ERG-202ENST00000398897 4651 ntTSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USH2AO75445 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
USH2AO75445 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
USH2AO75445 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
USH2AO75445 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 TEK-204ENST00000519097 3836 ntTSL 2 BASIC2.17□□□□□ -2.06
USH2AO75445 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
USH2AO75445 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC2.16□□□□□ -2.06
USH2AO75445 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 RNU1-136P-201ENST00000384181 164 ntBASIC2.16□□□□□ -2.06
USH2AO75445 AC097374.1-203ENST00000400783 485 ntBASIC2.16□□□□□ -2.06
USH2AO75445 PPIAP9-201ENST00000403866 498 ntBASIC2.16□□□□□ -2.06
USH2AO75445 UQCRBP1-201ENST00000421129 336 ntBASIC2.16□□□□□ -2.06
USH2AO75445 NRBF2P3-201ENST00000432731 865 ntBASIC2.16□□□□□ -2.06
USH2AO75445 AC098976.1-201ENST00000513014 541 ntBASIC2.16□□□□□ -2.06
USH2AO75445 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC2.16□□□□□ -2.06
USH2AO75445 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC2.16□□□□□ -2.06
USH2AO75445 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.16□□□□□ -2.06
USH2AO75445 PSMB7P1-201ENST00000556349 514 ntBASIC2.16□□□□□ -2.06
USH2AO75445 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC2.16□□□□□ -2.06
USH2AO75445 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.16□□□□□ -2.06
USH2AO75445 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC2.16□□□□□ -2.06
USH2AO75445 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
USH2AO75445 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC2.16□□□□□ -2.06
USH2AO75445 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
USH2AO75445 AC119674.1-213ENST00000641177 1386 ntBASIC2.16□□□□□ -2.06
USH2AO75445 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
USH2AO75445 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 DOPEY2-202ENST00000399151 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC2.16□□□□□ -2.06
USH2AO75445 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC2.16□□□□□ -2.06
USH2AO75445 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC2.16□□□□□ -2.06
USH2AO75445 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC2.16□□□□□ -2.06
USH2AO75445 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC2.16□□□□□ -2.06
USH2AO75445 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC2.16□□□□□ -2.06
USH2AO75445 ARL6IP1P3-201ENST00000524544 560 ntBASIC2.16□□□□□ -2.06
USH2AO75445 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC2.16□□□□□ -2.06
USH2AO75445 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.16□□□□□ -2.06
USH2AO75445 MIR3653-201ENST00000625572 110 ntBASIC2.16□□□□□ -2.06
USH2AO75445 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC2.16□□□□□ -2.06
USH2AO75445 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC2.16□□□□□ -2.06
USH2AO75445 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
USH2AO75445 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
USH2AO75445 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC2.16□□□□□ -2.06
USH2AO75445 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC2.16□□□□□ -2.06
USH2AO75445 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
USH2AO75445 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 TRPC5-201ENST00000262839 5839 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
USH2AO75445 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.16□□□□□ -2.06
USH2AO75445 RPL5P32-201ENST00000454085 879 ntBASIC2.16□□□□□ -2.06
USH2AO75445 AC026427.2-201ENST00000506228 536 ntBASIC2.16□□□□□ -2.06
USH2AO75445 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms