Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 RN7SKP186-201ENST00000365371 303 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 RPL11P3-201ENST00000395256 523 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 AC119751.3-201ENST00000399720 670 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS4BO75351 METTL15P3-201ENST00000415522 1221 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 AL354868.1-201ENST00000417077 482 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 KRR1P1-201ENST00000419430 803 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 RPL7P34-201ENST00000433316 712 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS4BO75351 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS4BO75351 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS4BO75351 RN7SL717P-201ENST00000478343 297 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 PDCL3P4-201ENST00000489621 720 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 OR7E99P-201ENST00000505750 922 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 AC008638.1-201ENST00000506035 866 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS4BO75351 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS4BO75351 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS4BO75351 GAPDHP71-201ENST00000511530 1003 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 RFPL4AP3-201ENST00000515267 345 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS4BO75351 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS4BO75351 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS4BO75351 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS4BO75351 CYB5AP5-201ENST00000549779 389 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS4BO75351 AL049830.4-201ENST00000555149 351 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS4BO75351 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS4BO75351 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS4BO75351 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS4BO75351 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.83□□□□□ -1.48
VPS4BO75351 AP001823.1-201ENST00000604056 1003 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS4BO75351 AL512624.1-201ENST00000613638 469 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 AC022079.2-201ENST00000619739 566 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 AC232271.1-201ENST00000602455 2715 ntBASIC5.83□□□□□ -1.48
VPS4BO75351 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS4BO75351 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS4BO75351 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
VPS4BO75351 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS4BO75351 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
VPS4BO75351 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS4BO75351 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VPS4BO75351 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
VPS4BO75351 AL359955.1-201ENST00000455242 3275 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS4BO75351 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS4BO75351 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VPS4BO75351 AL049545.1-201ENST00000401856 572 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS4BO75351 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.82□□□□□ -1.48
VPS4BO75351 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS4BO75351 AC093422.3-201ENST00000428506 305 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS4BO75351 RPL5P2-201ENST00000429598 854 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AC094019.1-201ENST00000434678 472 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS4BO75351 CR769776.1-201ENST00000441254 787 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS4BO75351 BMS1P10-201ENST00000443754 1120 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 HMGB1P5-202ENST00000451497 985 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AC008280.2-201ENST00000455473 307 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 CR383656.1-201ENST00000484916 377 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS4BO75351 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS4BO75351 OR5H7P-201ENST00000514084 930 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 RNA5SP434-201ENST00000516647 121 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 IGLV2-28-201ENST00000520681 304 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.82□□□□□ -1.48
VPS4BO75351 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VPS4BO75351 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS4BO75351 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VPS4BO75351 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.82□□□□□ -1.48
VPS4BO75351 AL121594.2-201ENST00000541658 472 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.82□□□□□ -1.48
VPS4BO75351 AP003717.3-201ENST00000544832 1180 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AC007956.1-201ENST00000555623 542 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS4BO75351 AC016180.1-201ENST00000567945 403 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS4BO75351 LINC00556-201ENST00000569603 412 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS4BO75351 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.82□□□□□ -1.48
VPS4BO75351 AC067838.1-201ENST00000606064 577 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AC022106.1-201ENST00000612834 766 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 AP003485.2-201ENST00000623636 610 ntBASIC5.82□□□□□ -1.48
VPS4BO75351 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS4BO75351 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.82□□□□□ -1.48
VPS4BO75351 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VPS4BO75351 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms