Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 LINC02210-201ENST00000444561 288 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.88□□□□□ -1.63
LMX1BO60663 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 AL606490.1-201ENST00000452266 765 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 TRBV8-1-201ENST00000481590 279 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 RPL32P9-201ENST00000487963 407 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 OR9N1P-201ENST00000491296 333 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 OR5M14P-201ENST00000506803 618 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.88□□□□□ -1.63
LMX1BO60663 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.88□□□□□ -1.63
LMX1BO60663 AC021678.3-201ENST00000517893 476 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.88□□□□□ -1.63
LMX1BO60663 GTF2IP11-201ENST00000526931 420 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 AC027026.1-201ENST00000532323 742 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 AC139103.1-201ENST00000534696 1030 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 AC122688.1-201ENST00000541494 223 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.88□□□□□ -1.63
LMX1BO60663 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.88□□□□□ -1.63
LMX1BO60663 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.88□□□□□ -1.63
LMX1BO60663 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.88□□□□□ -1.63
LMX1BO60663 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.88□□□□□ -1.63
LMX1BO60663 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.88□□□□□ -1.63
LMX1BO60663 AC044860.2-201ENST00000561005 179 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 AL049838.1-201ENST00000563647 981 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 OOSP1P2-201ENST00000579644 351 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 MIR1269B-201ENST00000580405 75 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 AC008507.2-201ENST00000588402 1176 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.88□□□□□ -1.63
LMX1BO60663 AC004948.1-201ENST00000609858 672 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 MIR6798-201ENST00000612887 67 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 AP001029.2-203ENST00000589795 4910 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LMX1BO60663 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.88□□□□□ -1.63
LMX1BO60663 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.88□□□□□ -1.63
LMX1BO60663 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.88□□□□□ -1.63
LMX1BO60663 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
LMX1BO60663 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
LMX1BO60663 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.88□□□□□ -1.63
LMX1BO60663 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.88□□□□□ -1.63
LMX1BO60663 AC120036.2-201ENST00000509729 1474 ntBASIC4.88□□□□□ -1.63
LMX1BO60663 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.88□□□□□ -1.63
LMX1BO60663 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMX1BO60663 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMX1BO60663 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.87□□□□□ -1.63
LMX1BO60663 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.87□□□□□ -1.63
LMX1BO60663 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.87□□□□□ -1.63
LMX1BO60663 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMX1BO60663 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMX1BO60663 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMX1BO60663 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LMX1BO60663 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LMX1BO60663 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.87□□□□□ -1.63
LMX1BO60663 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LMX1BO60663 SNORA64.1-201ENST00000362600 132 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 RN7SKP124-201ENST00000364730 341 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
LMX1BO60663 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.87□□□□□ -1.63
LMX1BO60663 TRAV35-201ENST00000390462 330 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 RNU6-1000P-201ENST00000391066 106 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 RN7SKP59-201ENST00000410520 314 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 SSR1P2-201ENST00000415208 787 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.87□□□□□ -1.63
LMX1BO60663 VPS26BP1-201ENST00000417155 755 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AC009784.1-201ENST00000426484 460 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AC114973.1-201ENST00000429057 632 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AL392003.1-201ENST00000434394 243 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 NDUFB4P8-201ENST00000435351 367 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LMX1BO60663 SNORD125-201ENST00000459538 96 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AC022215.1-201ENST00000481770 362 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.87□□□□□ -1.63
LMX1BO60663 MTCO2P9-201ENST00000503214 694 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AC010468.3-201ENST00000508225 458 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AC074255.1-201ENST00000511259 501 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.87□□□□□ -1.63
LMX1BO60663 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.87□□□□□ -1.63
LMX1BO60663 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.87□□□□□ -1.63
LMX1BO60663 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.87□□□□□ -1.63
LMX1BO60663 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.87□□□□□ -1.63
LMX1BO60663 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LMX1BO60663 OR10G5P-201ENST00000532733 358 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.87□□□□□ -1.63
LMX1BO60663 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.87□□□□□ -1.63
LMX1BO60663 YWHAZP1-201ENST00000556286 722 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.87□□□□□ -1.63
LMX1BO60663 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.87□□□□□ -1.63
LMX1BO60663 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.87□□□□□ -1.63
LMX1BO60663 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.87□□□□□ -1.63
LMX1BO60663 AC108359.1-201ENST00000616451 1211 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AC037198.3-201ENST00000616754 526 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AP000484.1-201ENST00000620067 1252 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AC018445.2-201ENST00000622987 260 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AL356863.1-201ENST00000623378 1080 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.87□□□□□ -1.63
LMX1BO60663 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.87□□□□□ -1.63
LMX1BO60663 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.87□□□□□ -1.63
LMX1BO60663 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.87□□□□□ -1.63
LMX1BO60663 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LMX1BO60663 AL138820.1-201ENST00000617901 5305 ntBASIC4.87□□□□□ -1.63
LMX1BO60663 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms