Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SNX3O60493 AP000580.1-201ENST00000404439 358 ntBASIC5.1□□□□□ -1.59
SNX3O60493 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX3O60493 Z68694.1-201ENST00000413929 841 ntBASIC5.1□□□□□ -1.59
SNX3O60493 E2F6P2-201ENST00000420708 748 ntBASIC5.1□□□□□ -1.59
SNX3O60493 GLUD1P9-201ENST00000420997 1173 ntBASIC5.1□□□□□ -1.59
SNX3O60493 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.1□□□□□ -1.59
SNX3O60493 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX3O60493 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX3O60493 AL161722.2-201ENST00000434731 981 ntBASIC5.1□□□□□ -1.59
SNX3O60493 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX3O60493 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.1□□□□□ -1.59
SNX3O60493 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.1□□□□□ -1.59
SNX3O60493 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX3O60493 MTND4P21-201ENST00000453886 1357 ntBASIC5.1□□□□□ -1.59
SNX3O60493 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SNX3O60493 AC019084.1-201ENST00000457337 432 ntBASIC5.1□□□□□ -1.59
SNX3O60493 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.1□□□□□ -1.59
SNX3O60493 EIF2S2P4-201ENST00000461070 984 ntBASIC5.1□□□□□ -1.59
SNX3O60493 RPS27P20-201ENST00000492051 246 ntBASIC5.1□□□□□ -1.59
SNX3O60493 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX3O60493 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.1□□□□□ -1.59
SNX3O60493 HMGB1P44-201ENST00000508597 572 ntBASIC5.1□□□□□ -1.59
SNX3O60493 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX3O60493 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX3O60493 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.1□□□□□ -1.59
SNX3O60493 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.1□□□□□ -1.59
SNX3O60493 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX3O60493 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX3O60493 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.1□□□□□ -1.59
SNX3O60493 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.1□□□□□ -1.59
SNX3O60493 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX3O60493 MT1CP-201ENST00000567054 174 ntBASIC5.1□□□□□ -1.59
SNX3O60493 AC005726.4-201ENST00000582858 458 ntBASIC5.1□□□□□ -1.59
SNX3O60493 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX3O60493 AC005252.1-201ENST00000604518 1063 ntBASIC5.1□□□□□ -1.59
SNX3O60493 IMMP1LP1-201ENST00000605170 488 ntBASIC5.1□□□□□ -1.59
SNX3O60493 PPATP2-201ENST00000605635 508 ntBASIC5.1□□□□□ -1.59
SNX3O60493 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.1□□□□□ -1.59
SNX3O60493 AC025262.3-201ENST00000623666 360 ntBASIC5.1□□□□□ -1.59
SNX3O60493 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX3O60493 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX3O60493 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX3O60493 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
SNX3O60493 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.1□□□□□ -1.59
SNX3O60493 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX3O60493 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX3O60493 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SNX3O60493 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
SNX3O60493 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNX3O60493 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.09□□□□□ -1.59
SNX3O60493 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.09□□□□□ -1.59
SNX3O60493 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNX3O60493 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.09□□□□□ -1.59
SNX3O60493 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX3O60493 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX3O60493 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNX3O60493 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNX3O60493 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.09□□□□□ -1.59
SNX3O60493 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNX3O60493 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNX3O60493 AC133552.1-201ENST00000569988 4007 ntBASIC5.09□□□□□ -1.59
SNX3O60493 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SNX3O60493 AC010132.2-201ENST00000295493 1043 ntBASIC5.09□□□□□ -1.59
SNX3O60493 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SNX3O60493 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNX3O60493 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX3O60493 RNU6-1251P-201ENST00000364502 107 ntBASIC5.09□□□□□ -1.59
SNX3O60493 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNX3O60493 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SNX3O60493 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.09□□□□□ -1.59
SNX3O60493 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX3O60493 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX3O60493 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX3O60493 CKS1BP6-201ENST00000424932 240 ntBASIC5.09□□□□□ -1.59
SNX3O60493 AC113412.1-201ENST00000425840 504 ntBASIC5.09□□□□□ -1.59
SNX3O60493 BX323845.3-201ENST00000428215 527 ntBASIC5.09□□□□□ -1.59
SNX3O60493 MTND4LP7-201ENST00000431728 294 ntBASIC5.09□□□□□ -1.59
SNX3O60493 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.09□□□□□ -1.59
SNX3O60493 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX3O60493 AL157884.3-201ENST00000448273 1184 ntBASIC5.09□□□□□ -1.59
SNX3O60493 RHEBP2-201ENST00000450289 600 ntBASIC5.09□□□□□ -1.59
SNX3O60493 AC093166.2-201ENST00000455969 1017 ntBASIC5.09□□□□□ -1.59
SNX3O60493 AP002345.1-201ENST00000456493 928 ntBASIC5.09□□□□□ -1.59
SNX3O60493 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.09□□□□□ -1.59
SNX3O60493 AC023194.2-201ENST00000465398 406 ntBASIC5.09□□□□□ -1.59
SNX3O60493 AC104629.2-201ENST00000468627 598 ntBASIC5.09□□□□□ -1.59
SNX3O60493 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX3O60493 RPL37AP8-201ENST00000494116 276 ntBASIC5.09□□□□□ -1.59
SNX3O60493 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.09□□□□□ -1.59
SNX3O60493 GUSBP9-201ENST00000510138 584 ntBASIC5.09□□□□□ -1.59
SNX3O60493 SCARNA16.4-201ENST00000516956 187 ntBASIC5.09□□□□□ -1.59
SNX3O60493 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX3O60493 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.09□□□□□ -1.59
SNX3O60493 EIF4A2P5-201ENST00000529914 499 ntBASIC5.09□□□□□ -1.59
SNX3O60493 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.09□□□□□ -1.59
SNX3O60493 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.09□□□□□ -1.59
SNX3O60493 AC116553.2-201ENST00000564203 463 ntBASIC5.09□□□□□ -1.59
SNX3O60493 AC002519.2-203ENST00000567043 837 ntBASIC5.09□□□□□ -1.59
SNX3O60493 AC005341.1-201ENST00000571086 708 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms