Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 AC006206.1-201ENST00000544842 3387 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.52□□□□□ -1.53
SMAD6O43541 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 OR9K1P-201ENST00000326513 941 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SMAD6O43541 RNA5SP339-201ENST00000390987 122 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
SMAD6O43541 EI24P3-201ENST00000399046 1062 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 MIR1286-201ENST00000408112 78 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 SNORA81-201ENST00000408493 178 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.52□□□□□ -1.53
SMAD6O43541 DSTNP5-201ENST00000427921 523 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.52□□□□□ -1.53
SMAD6O43541 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.52□□□□□ -1.53
SMAD6O43541 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.52□□□□□ -1.53
SMAD6O43541 AC011242.1-201ENST00000433596 1158 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.52□□□□□ -1.53
SMAD6O43541 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.52□□□□□ -1.53
SMAD6O43541 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.52□□□□□ -1.53
SMAD6O43541 RPL12P18-201ENST00000437175 325 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 AL691517.1-201ENST00000440833 1235 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.52□□□□□ -1.53
SMAD6O43541 LINC02210-201ENST00000444561 288 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 AC073072.2-201ENST00000447425 348 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 IGBP1P3-201ENST00000447449 1000 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 AL035090.1-201ENST00000454835 332 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 EIF2S2P4-201ENST00000461070 984 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.52□□□□□ -1.53
SMAD6O43541 OR2AO1P-201ENST00000476497 403 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 AC098583.1-201ENST00000480875 255 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.52□□□□□ -1.53
SMAD6O43541 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.52□□□□□ -1.53
SMAD6O43541 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.52□□□□□ -1.53
SMAD6O43541 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.52□□□□□ -1.53
SMAD6O43541 AC097486.1-201ENST00000515331 210 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.52□□□□□ -1.53
SMAD6O43541 AC084824.2-201ENST00000548906 345 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.52□□□□□ -1.53
SMAD6O43541 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.52□□□□□ -1.53
SMAD6O43541 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.52□□□□□ -1.53
SMAD6O43541 AC112220.2-201ENST00000605513 533 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SMAD6O43541 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.52□□□□□ -1.53
SMAD6O43541 AC006963.1-201ENST00000624003 1052 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SMAD6O43541 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.52□□□□□ -1.53
SMAD6O43541 AC073869.8-201ENST00000641806 335 ntBASIC5.52□□□□□ -1.53
SMAD6O43541 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SMAD6O43541 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.52□□□□□ -1.53
SMAD6O43541 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.52□□□□□ -1.53
SMAD6O43541 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMAD6O43541 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.51□□□□□ -1.53
SMAD6O43541 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.51□□□□□ -1.53
SMAD6O43541 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMAD6O43541 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.51□□□□□ -1.53
SMAD6O43541 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMAD6O43541 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMAD6O43541 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMAD6O43541 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SMAD6O43541 PABPC1P6-201ENST00000445594 1829 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 MRRFP1-201ENST00000435941 1675 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.51□□□□□ -1.53
SMAD6O43541 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
SMAD6O43541 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.51□□□□□ -1.53
SMAD6O43541 RNU4-40P-201ENST00000364351 143 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.51□□□□□ -1.53
SMAD6O43541 RNU6-891P-201ENST00000384280 111 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 GAPDHP15-201ENST00000398586 975 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMAD6O43541 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMAD6O43541 GNG5P5-201ENST00000420444 220 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SMAD6O43541 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.51□□□□□ -1.53
SMAD6O43541 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.51□□□□□ -1.53
SMAD6O43541 AC108751.3-201ENST00000461814 1020 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 TRAV31-201ENST00000502780 342 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.51□□□□□ -1.53
SMAD6O43541 HMGB1P44-201ENST00000508597 572 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 AC021106.1-201ENST00000509020 1058 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 AC109464.1-201ENST00000511091 819 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 RNU6-941P-201ENST00000516346 108 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 RNA5SP34-201ENST00000516887 130 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 CIR1P1-201ENST00000524055 1133 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.51□□□□□ -1.53
SMAD6O43541 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.51□□□□□ -1.53
SMAD6O43541 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMAD6O43541 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms