Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SLC20A1P1-201ENST00000413906 956 ntBASIC5.71□□□□□ -1.5
PROM1O43490 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.71□□□□□ -1.5
PROM1O43490 AC008173.1-201ENST00000418901 264 ntBASIC5.71□□□□□ -1.5
PROM1O43490 GLUD1P9-201ENST00000420997 1173 ntBASIC5.71□□□□□ -1.5
PROM1O43490 USP9YP11-201ENST00000427537 717 ntBASIC5.71□□□□□ -1.5
PROM1O43490 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.71□□□□□ -1.5
PROM1O43490 BX119321.1-201ENST00000428912 797 ntBASIC5.71□□□□□ -1.5
PROM1O43490 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PROM1O43490 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.71□□□□□ -1.5
PROM1O43490 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.71□□□□□ -1.5
PROM1O43490 MTND4P32-201ENST00000437189 1237 ntBASIC5.71□□□□□ -1.5
PROM1O43490 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PROM1O43490 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.71□□□□□ -1.5
PROM1O43490 AL353662.1-201ENST00000439099 327 ntBASIC5.71□□□□□ -1.5
PROM1O43490 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.71□□□□□ -1.5
PROM1O43490 AC097463.1-201ENST00000447288 481 ntBASIC5.71□□□□□ -1.5
PROM1O43490 AC016027.4-201ENST00000450866 277 ntBASIC5.71□□□□□ -1.5
PROM1O43490 RBMY2TP-201ENST00000451162 947 ntBASIC5.71□□□□□ -1.5
PROM1O43490 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.71□□□□□ -1.5
PROM1O43490 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.71□□□□□ -1.5
PROM1O43490 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.71□□□□□ -1.5
PROM1O43490 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PROM1O43490 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
PROM1O43490 AC083795.1-201ENST00000491760 320 ntBASIC5.71□□□□□ -1.5
PROM1O43490 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PROM1O43490 AC010486.2-201ENST00000505572 483 ntBASIC5.71□□□□□ -1.5
PROM1O43490 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.71□□□□□ -1.5
PROM1O43490 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.71□□□□□ -1.5
PROM1O43490 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.71□□□□□ -1.5
PROM1O43490 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PROM1O43490 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.71□□□□□ -1.5
PROM1O43490 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.71□□□□□ -1.5
PROM1O43490 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PROM1O43490 ZNF321P-202ENST00000550843 495 ntBASIC5.71□□□□□ -1.5
PROM1O43490 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.71□□□□□ -1.5
PROM1O43490 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.71□□□□□ -1.5
PROM1O43490 AGGF1P6-201ENST00000569213 976 ntBASIC5.71□□□□□ -1.5
PROM1O43490 AC090826.1-203ENST00000569235 490 ntBASIC5.71□□□□□ -1.5
PROM1O43490 ZNF92P3-201ENST00000596594 954 ntBASIC5.71□□□□□ -1.5
PROM1O43490 AC068768.2-201ENST00000602352 343 ntBASIC5.71□□□□□ -1.5
PROM1O43490 AL358072.1-201ENST00000604156 575 ntBASIC5.71□□□□□ -1.5
PROM1O43490 AC025588.2-201ENST00000604851 466 ntBASIC5.71□□□□□ -1.5
PROM1O43490 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.71□□□□□ -1.5
PROM1O43490 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.71□□□□□ -1.5
PROM1O43490 AC122108.2-201ENST00000611946 526 ntBASIC5.71□□□□□ -1.5
PROM1O43490 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.71□□□□□ -1.5
PROM1O43490 AC022079.2-201ENST00000619739 566 ntBASIC5.71□□□□□ -1.5
PROM1O43490 SNX18P12-201ENST00000624821 759 ntBASIC5.71□□□□□ -1.5
PROM1O43490 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.71□□□□□ -1.5
PROM1O43490 AC073488.3-201ENST00000631611 778 ntBASIC5.71□□□□□ -1.5
PROM1O43490 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PROM1O43490 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
PROM1O43490 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PROM1O43490 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PROM1O43490 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PROM1O43490 AC093671.1-201ENST00000624981 2929 ntBASIC5.71□□□□□ -1.5
PROM1O43490 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.5
PROM1O43490 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.71□□□□□ -1.5
PROM1O43490 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PROM1O43490 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.7□□□□□ -1.5
PROM1O43490 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.7□□□□□ -1.5
PROM1O43490 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PROM1O43490 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PROM1O43490 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.7□□□□□ -1.5
PROM1O43490 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PROM1O43490 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.7□□□□□ -1.5
PROM1O43490 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
PROM1O43490 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PROM1O43490 AC120338.1-201ENST00000625074 1541 ntBASIC5.7□□□□□ -1.5
PROM1O43490 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PROM1O43490 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PROM1O43490 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PROM1O43490 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PROM1O43490 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PROM1O43490 SNORA51.1-201ENST00000363243 140 ntBASIC5.7□□□□□ -1.5
PROM1O43490 RNU6-1251P-201ENST00000364502 107 ntBASIC5.7□□□□□ -1.5
PROM1O43490 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.7□□□□□ -1.5
PROM1O43490 AC004386.1-201ENST00000393214 761 ntBASIC5.7□□□□□ -1.5
PROM1O43490 SKINT1L-201ENST00000401057 817 ntBASIC5.7□□□□□ -1.5
PROM1O43490 ATF1P1-201ENST00000406040 927 ntBASIC5.7□□□□□ -1.5
PROM1O43490 MYL6P5-201ENST00000412707 459 ntBASIC5.7□□□□□ -1.5
PROM1O43490 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.7□□□□□ -1.5
PROM1O43490 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 IPPKP1-201ENST00000422501 768 ntBASIC5.7□□□□□ -1.5
PROM1O43490 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.7□□□□□ -1.5
PROM1O43490 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PROM1O43490 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 RPL12P16-201ENST00000431098 498 ntBASIC5.7□□□□□ -1.5
PROM1O43490 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.7□□□□□ -1.5
PROM1O43490 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.7□□□□□ -1.5
PROM1O43490 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
PROM1O43490 ZNF886P-201ENST00000450781 723 ntBASIC5.7□□□□□ -1.5
PROM1O43490 PTGES3P5-201ENST00000455109 434 ntBASIC5.7□□□□□ -1.5
PROM1O43490 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.7□□□□□ -1.5
PROM1O43490 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.7□□□□□ -1.5
PROM1O43490 RPS12P31-201ENST00000491419 398 ntBASIC5.7□□□□□ -1.5
PROM1O43490 AC093752.1-206ENST00000511823 336 ntBASIC5.7□□□□□ -1.5
PROM1O43490 RN7SKP35-201ENST00000517210 151 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms