Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXN3O00409 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.05□□□□□ -1.44
FOXN3O00409 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXN3O00409 TOMM20P1-201ENST00000534518 427 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 OR8X1P-201ENST00000534542 869 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.05□□□□□ -1.44
FOXN3O00409 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
FOXN3O00409 NANOGNBP2-201ENST00000544753 553 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AC009712.1-201ENST00000564938 316 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AC012254.4-201ENST00000588843 273 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.05□□□□□ -1.44
FOXN3O00409 AC010487.1-201ENST00000594408 1172 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AL360012.1-201ENST00000602813 131 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AL138895.2-201ENST00000603019 178 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AC067773.1-201ENST00000603284 1094 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.05□□□□□ -1.44
FOXN3O00409 AL359513.1-201ENST00000614364 557 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 MIR6071-201ENST00000616741 78 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AL122125.1-201ENST00000616999 600 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 RN7SL544P-201ENST00000617232 284 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 RN7SL763P-201ENST00000620922 284 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AC126544.2-201ENST00000625174 749 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.05□□□□□ -1.44
FOXN3O00409 OR4G3P-201ENST00000633500 913 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.05□□□□□ -1.44
FOXN3O00409 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.05□□□□□ -1.44
FOXN3O00409 AP001153.1-201ENST00000641024 338 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXN3O00409 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXN3O00409 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
FOXN3O00409 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
FOXN3O00409 OR4F13P-202ENST00000560066 2054 ntBASIC6.05□□□□□ -1.44
FOXN3O00409 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
FOXN3O00409 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXN3O00409 AC006206.1-201ENST00000544842 3387 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXN3O00409 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXN3O00409 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXN3O00409 AL645568.2-201ENST00000432815 1337 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 HSPD1P14-201ENST00000432666 1618 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 UGT2B26P-201ENST00000508672 1613 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FOXN3O00409 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
FOXN3O00409 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
FOXN3O00409 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXN3O00409 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.04□□□□□ -1.44
FOXN3O00409 RNU6-729P-201ENST00000384399 107 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXN3O00409 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXN3O00409 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXN3O00409 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXN3O00409 AC127526.2-201ENST00000426436 775 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 FO393419.3-201ENST00000428741 282 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 AL022331.1-201ENST00000429025 477 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXN3O00409 TMEM183AP1-205ENST00000432739 290 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 MED6P1-201ENST00000439659 713 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.04□□□□□ -1.44
FOXN3O00409 RPL21P18-201ENST00000469899 480 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 AC104982.1-201ENST00000478775 574 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 GTF2IP9-201ENST00000502460 301 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXN3O00409 MAL2-205ENST00000521048 575 ntTSL 4 BASIC6.04□□□□□ -1.44
FOXN3O00409 MRPS16P1-201ENST00000523462 412 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 AC122688.1-201ENST00000541494 223 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FOXN3O00409 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXN3O00409 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXN3O00409 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXN3O00409 AC015802.2-201ENST00000589690 189 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXN3O00409 RNU6-1192P-201ENST00000612197 107 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 BNIP3P41-202ENST00000616656 861 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 AL356274.1-201ENST00000617064 410 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 RNU6-489P-201ENST00000618289 107 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 AP005431.1-201ENST00000618479 319 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXN3O00409 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
FOXN3O00409 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
FOXN3O00409 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
FOXN3O00409 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXN3O00409 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
FOXN3O00409 AC133552.1-201ENST00000569988 4007 ntBASIC6.04□□□□□ -1.44
FOXN3O00409 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXN3O00409 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXN3O00409 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXN3O00409 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXN3O00409 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXN3O00409 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
FOXN3O00409 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FOXN3O00409 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FOXN3O00409 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
FOXN3O00409 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FOXN3O00409 AC019072.1-201ENST00000604535 1551 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FOXN3O00409 RNU6-468P-201ENST00000384003 109 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 CHMP1B2P-201ENST00000399581 597 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 RN7SKP240-201ENST00000410583 375 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 AC096533.1-201ENST00000411645 353 ntBASIC6.03□□□□□ -1.44
FOXN3O00409 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms