Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC188H7C350 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC188H7C350 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CCDC188H7C350 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC188H7C350 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.46□□□□□ -1.53
CCDC188H7C350 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
CCDC188H7C350 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC188H7C350 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC188H7C350 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC188H7C350 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC188H7C350 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC188H7C350 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC188H7C350 MIR137-201ENST00000385223 102 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 AC004386.1-201ENST00000393214 761 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 AC005522.1-201ENST00000395416 346 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 HSPA8P15-201ENST00000401676 786 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 MTND4LP13-201ENST00000425022 298 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 MGAT2P2-201ENST00000427194 797 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 AC019185.1-201ENST00000442718 389 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 AC105399.1-202ENST00000447303 205 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 TPT1P1-201ENST00000458495 518 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 AC073073.1-201ENST00000493920 463 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC188H7C350 ACTR6P1-201ENST00000514311 1104 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC188H7C350 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC188H7C350 YWHABP2-201ENST00000540201 713 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 AC068993.1-201ENST00000546724 589 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC188H7C350 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.46□□□□□ -1.54
CCDC188H7C350 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC188H7C350 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC188H7C350 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC188H7C350 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC188H7C350 AC008814.1-201ENST00000603797 406 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 KATNBL1P1-201ENST00000605192 748 ntBASIC5.46□□□□□ -1.54
CCDC188H7C350 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.46□□□□□ -1.54
CCDC188H7C350 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC188H7C350 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC188H7C350 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC188H7C350 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.46□□□□□ -1.54
CCDC188H7C350 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC188H7C350 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC188H7C350 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC188H7C350 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CCDC188H7C350 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.54
CCDC188H7C350 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC188H7C350 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC188H7C350 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.46□□□□□ -1.54
CCDC188H7C350 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC188H7C350 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CCDC188H7C350 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC188H7C350 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC188H7C350 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CCDC188H7C350 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC188H7C350 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC188H7C350 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC188H7C350 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CCDC188H7C350 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
CCDC188H7C350 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 RN7SKP74-201ENST00000362849 309 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 RN7SKP171-201ENST00000364417 303 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CCDC188H7C350 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CCDC188H7C350 RNA5SP487-201ENST00000410186 122 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 AL512504.1-201ENST00000415494 778 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC188H7C350 OR2AH1P-201ENST00000425717 928 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 RPL34P6-201ENST00000432390 345 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC188H7C350 EEF1B2P3-201ENST00000447718 678 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 AC108161.1-201ENST00000461060 402 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.45□□□□□ -1.54
CCDC188H7C350 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC188H7C350 HMGB3P16-201ENST00000508037 287 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC188H7C350 RNA5SP473-201ENST00000516402 125 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 AC109635.6-201ENST00000525487 1113 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 AC092868.3-201ENST00000560515 784 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.45□□□□□ -1.54
CCDC188H7C350 MIR4271-201ENST00000582451 67 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 LINC00216-201ENST00000623548 1126 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.45□□□□□ -1.54
CCDC188H7C350 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CCDC188H7C350 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CCDC188H7C350 AC106872.5-201ENST00000508856 1416 ntBASIC5.45□□□□□ -1.54
CCDC188H7C350 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms