Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AL353796.1-201ENST00000561542 3241 ntBASIC5.69□□□□□ -1.5
TCRBV5S1A1TA0A578 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC009135.2-201ENST00000624136 1768 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 OR56A4-201ENST00000330728 1209 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 MIR133B-201ENST00000362210 119 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 RNU5E-10P-201ENST00000363506 118 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 Z86062.1-201ENST00000406773 777 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC098592.2-201ENST00000413158 265 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC079807.1-201ENST00000429993 481 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AL606490.7-201ENST00000433136 191 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 RPL7P33-201ENST00000444159 742 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC016772.1-201ENST00000444170 1261 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AL161636.2-201ENST00000445179 927 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC022336.1-201ENST00000475510 337 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 PPIAP19-201ENST00000486414 492 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 HMGB1P44-201ENST00000508597 572 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 IMPA1P1-201ENST00000510718 842 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC005351.1-201ENST00000511152 786 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC093770.1-201ENST00000511559 571 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 TMEM97P2-201ENST00000517841 403 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC092709.1-201ENST00000521355 1045 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AP004607.2-201ENST00000533949 322 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 NOP56P3-201ENST00000549457 385 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC015720.2-201ENST00000567709 334 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC011492.1-201ENST00000600023 315 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC104695.2-201ENST00000605056 775 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AL669942.2-201ENST00000620352 697 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC093875.1-201ENST00000623688 504 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AC103703.1-201ENST00000634783 663 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AP001029.2-203ENST00000589795 4910 ntBASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TCRBV5S1A1TA0A578 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC027279.1-201ENST00000568885 4284 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 TMSB4XP4-201ENST00000323496 618 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 OR4K12P-201ENST00000406538 961 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 RNU4-27P-201ENST00000410889 139 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 RANP4-201ENST00000413361 655 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC104843.2-201ENST00000427666 297 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AL136231.1-201ENST00000429407 730 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 RNFT1P2-201ENST00000443064 757 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 Z77249.1-201ENST00000444622 1175 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC105399.1-202ENST00000447303 205 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 RPL31P15-201ENST00000449770 338 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AL009048.1-201ENST00000450437 298 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 RPL35AP19-201ENST00000469425 329 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AP000797.2-201ENST00000475768 606 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 SETP6-201ENST00000479329 568 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC058823.1-201ENST00000485315 474 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC090638.1-201ENST00000498296 909 ntBASIC5.67□□□□□ -1.5
TCRBV5S1A1TA0A578 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms