Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DRB4X5D2U9 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DRB4X5D2U9 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DRB4X5D2U9 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DRB4X5D2U9 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HLA-DRB4X5D2U9 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DRB4X5D2U9 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DRB4X5D2U9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DRB4X5D2U9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DRB4X5D2U9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC3.96□□□□□ -1.77
HLA-DRB4X5D2U9 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AC011503.2-201ENST00000594230 1500 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 NEAT1-202ENST00000501122 22743 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 FGG-205ENST00000407946 1636 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 ALB-209ENST00000503124 1741 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 OR9G4-201ENST00000302957 984 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 RNA5SP242-201ENST00000364171 118 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 SSX3-202ENST00000376893 800 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AL513325.1-201ENST00000417716 1034 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AL133325.1-201ENST00000421090 382 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AL035090.1-201ENST00000454835 332 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AC007386.1-201ENST00000455212 582 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AL133445.1-201ENST00000467051 452 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 RPL7P40-201ENST00000481703 745 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 RN7SL547P-201ENST00000490793 290 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 ARL4AP1-201ENST00000503220 705 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 IMPA1P1-201ENST00000510718 842 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 HMGB1P19-201ENST00000517578 577 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AC092709.1-201ENST00000521355 1045 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 YWHABP2-201ENST00000540201 713 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 SNORD95-201ENST00000579879 68 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 IGLCOR22-2-201ENST00000605398 313 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AP000648.2-201ENST00000624182 404 ntBASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DRB4X5D2U9 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 AL672167.1-204ENST00000641875 3017 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 RNA5SP435-201ENST00000364044 108 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 RNA5SP132-201ENST00000364725 118 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 RNA5SP339-201ENST00000390987 122 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 AC009804.1-201ENST00000400949 179 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 RN7SKP125-201ENST00000410481 302 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 AL121776.1-201ENST00000429337 372 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 CYCSP6-201ENST00000434498 302 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 CYCSP12-201ENST00000437729 300 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 AL136455.1-201ENST00000441083 1240 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 SPRYD7P1-201ENST00000443861 570 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 DNAJB5P1-201ENST00000454004 806 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 CBX1P5-201ENST00000475330 559 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 AC093827.1-201ENST00000480094 861 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 RPEP1-201ENST00000504507 658 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 AC073358.1-201ENST00000505671 684 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 RNA5SP362-201ENST00000516048 118 ntBASIC3.95□□□□□ -1.78
HLA-DRB4X5D2U9 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms